Siniperca chuatsi (mandarin fish): 122876832
Help
Entry
122876832 CDS
T08948
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03420
Nucleotide excision repair
schu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122876832 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
122876832 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122876832 (ercc8)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122876832 (ercc8)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122876832 (ercc8)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
122876832 (ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD_LRWD1
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
122876832
NCBI-ProteinID:
XP_044053550
LinkDB
All DBs
Position
LG5:complement(22206696..22224455)
Genome browser
AA seq
401 aa
AA seq
DB search
MLGFLTARQAGLDDPLRLRRAESTRRVLSLKLNPDRDVDRIHGNGINTIDIEAIEGRYML
SGGADGVIVIYDLENCNGKPQYTCKAVCTVGRSSRYVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFEGNVYSHHLSPIARKHSLIAVGTKNPKIQLCDLKSGSRIH
VLQGHRAEVLSVQWSPRYEHILATASADSKVKVWDVRRASGCLFTLDQHNGDKSKASSEA
VNTAHNGRVNGLCFTGDGLYLLTTGTDDRMRLWNSATGENTLVNYGKVCNESRKRLQFTV
SRGCSPEFVFVPCGSSVAMYALHTGELVTMLRGHYNNVDCCEFHPDYQELYSGGKDCNIL
AWVPVLRASDVEEESNIANKGAAGQSSVNPALQDAWSSDED
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgttggggtttctgacagcaaggcaggctgggctggatgaccctctgcgtctgagacgt
gcagagtcaacaagaagggtcctcagtctgaagttgaatcctgacagagacgtggacagg
atccatggaaatggcatcaacaccattgacattgaagcaatagagggcagatatatgttg
tctggtggagcagatggagtgatcgtcatctatgacctggagaactgcaatggaaaacca
cagtacacttgcaaggcagtttgcacagtaggcaggtccagtcggtatgtccacaaattc
agtgtcgagacagtccagtggtatccttatgacacaggcatgtttgtctccagttccttt
gacaagaccatgaaagtctgggacactgagacactgaagcctgctgaagtctttgagttt
gagggcaatgtctacagccaccacctgtcccccatcgccaggaagcacagtctcattgca
gttggcaccaaaaaccctaaaatccagctgtgtgacctgaagtctggttcacggattcat
gttcttcagggtcacagagcagaggtcctgtctgtgcagtggtcgcccagatacgagcac
atcttagccactgctagtgcagacagcaaagtgaaagtatgggatgtgcgtcgggcttct
gggtgtcttttcactctggaccagcacaatggagacaagtcaaaagcgtcctctgaggca
gtgaacacagctcataatggcagagtgaatggcctgtgctttactggcgatggcctctac
ctcctcactactggaactgatgaccgtatgcgactgtggaatagtgccactggggaaaac
acactggtaaattacgggaaggtctgcaacgagagtcgtaaaaggctacagttcacagtg
tcacgtggctgcagcccagagtttgtgttcgtgccatgcggcagctcagtagcgatgtat
gccctccacacaggagagctggtcactatgctcaggggtcactacaacaatgtcgactgc
tgcgaattccacccagactaccaggagctgtatagtggaggtaaagactgtaacatcctg
gcgtgggttcctgtccttcgtgcctcagatgtagaagaagagtcaaacattgcaaataag
ggtgctgctggccagtcttcagtgaaccctgccttacaagatgcatggagcagtgatgaa
gattaa
DBGET
integrated database retrieval system
