Siniperca chuatsi (mandarin fish): 122877009
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Entry
122877009 CDS
T08948
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04137
Mitophagy - animal
schu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122877009 (usp8)
04137 Mitophagy - animal
122877009 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122877009 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122877009 (usp8)
04121 Ubiquitin system [BR:
schu04121
]
122877009 (usp8)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122877009 (usp8)
Peptidases and inhibitors [BR:
schu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122877009 (usp8)
Membrane trafficking [BR:
schu04131
]
Endosome - Lysosome transport
Others
Others
122877009 (usp8)
Ubiquitin system [BR:
schu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122877009 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
122877009
NCBI-ProteinID:
XP_044054050
LinkDB
All DBs
Position
LG1:complement(10251056..10263537)
Genome browser
AA seq
1087 aa
AA seq
DB search
MPAVSTGVKELYLSTSLGDLNKKAEIKPDKTSTRSYVQSACKIFKAAEECRLDRDEEKSY
VLYMKYLTVYDIIKKRPDFKQQPEYYMTMLGPNSFKKAIEEAEKLSESLKLRYEEVEVRK
KLEEKERQEEKKRREEITEKDGGRGSPKAHANKKDSKKVKGEQNELKNATSKAVVPAGGI
TAEKLFHMMKDQAITIIVMDARSHGDFEESHIQVPAQACISVPEEAISPGITVNQIEAKL
PEVSKEHWRQRGFVDYIVLLDWFSSVTDLTLGTTLQSLKDALFKWDSITILRSEPLILEG
GYENWLLFYPMYTTNAKVRPPRQNIISTLPQLNFSYPSLEEPKPPTPPQPEPEVTPEPQE
PSAPVLVNGVAPAEPPTSKTSMVTDRLPDTIDFPVTGYTNSGLDLNNKGPATGTSSQSPA
TAKAFPQFDRTKKPSVRVSGEPKPSQNGSAKDYTKNGPVVPDRSVKPSIISNTSLSKEEE
SQIHSEAVAVMEKARQEQEKRIQERRSEEERREKDQKEKQLKEREDSEKRKKEEEGNGHQ
EKNKLERQKVEEEEDKKNKVWEDKEKRGKEQNSDTPSKSMSLDSPAPNHIVSEIKREPLT
RARSEEMGRSVPGLPDGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTVK
QKPPQPAEPDTNREQEREQSKLKRSYSSPDISQDLREEAQKKATAPTTAAVIPTINRETK
PAIAKAYSKVEIARPSAAKIRNLNPTFGGLGASLTGLRNMGNTCYMNSILQCLCNTPAMA
EYFNNNYYLEDINRSNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKITIGKINDQFA
SYDQQDSQELLLFLMDGLHEDLNKADNRKRYKEEENDHLDDQTAADLAWSKHKLLNESII
VALFQGQFKSTVQCMTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNK
VFCRHCKAHRDSTKKLEVWKVPPILLVHLKRFSYEGRWKQKLQTSVDFPLDSLDLGQYVI
GPKQNLKRYNLYGVSNHYGGLDGGHYTAYCKNALKQRWYKFDDHEVSDISTSSVKSSAAY
ILFYSTL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtatccaccggggtcaaggagctgtatctgtccacatctctgggtgacctc
aataaaaaggctgaaattaagccagacaagacaagtaccagaagctatgttcagagtgcc
tgcaaaatcttcaaggcggcagaggagtgtcgtctggacagagatgaagagaaatcttat
gtgctgtacatgaagtatttaacagtatatgacatcatcaagaaaagaccagacttcaag
caacaaccggagtattacatgaccatgcttgggccaaacagctttaagaaagccattgaa
gaagccgaaaagctctctgaaagccttaaactcaggtatgaggaagttgaggttcgaaaa
aaacttgaggagaaggagagacaagaggagaagaaaaggagggaggaaataacagagaaa
gatggtggtcgaggctctccaaaagcacatgcaaacaagaaggacagcaaaaaggtaaaa
ggagaacagaatgaactgaagaatgcaacctcaaaagctgtggtgccagctggtgggatc
acagctgagaaacttttccacatgatgaaggaccaggcgattacaataattgtcatggat
gcccgcagccacggggactttgaggagtctcacattcaggttccagcccaggcctgcatc
tccgtgcctgaggaggccattagcccaggaatcactgtgaatcagattgaggcaaagctg
ccagaggtgtccaaagagcattggaggcagcgaggatttgtggattatatagtcctgctg
gactggtttagctctgttactgaccttacactgggcaccaccttgcagagcctcaaagat
gccctctttaagtgggacagcatcaccatcctgcgtagtgagccgctaatactggaggga
ggctacgagaactggctgttgttttatcctatgtacacaaccaacgctaaagttcggccc
cctagacagaatatcatcagcactctccctcagttgaattttagctacccatccctagaa
gaaccaaagcctccgaccccacctcaaccagagcctgaggttacacctgagcctcaggaa
ccctcagctcctgtgctggtgaacggggttgcaccagcagaaccccccacatctaaaact
tccatggttactgacaggttgccagacactatcgatttccccgtcacaggctacacaaat
tctgggctagaccttaataacaagggccctgcgacaggcacatccagccagtcacctgca
acagctaaggccttcccacagtttgaccgtaccaagaaaccctctgtccgggtgtcgggc
gagcctaagcccagtcagaacggttcagcgaaggactacaccaagaacggcccagttgtc
cctgaccgctcagtcaaaccatccatcatctccaacacttctctttctaaagaagaagaa
agtcagatacactctgaggcggtggcagtgatggagaaggcgaggcaagaacaggagaaa
cgcatccaggaacgtcgttcagaggaggagaggcgggagaaggaccagaaggagaagcag
ttgaaagaaagggaggatagtgagaagaggaagaaggaagaggagggtaatggacaccag
gagaaaaataagctggaaaggcaaaaggtagaagaagaggaagacaaaaagaacaaggtg
tgggaggacaaagagaagaggggaaaggagcagaactctgatacgccctcaaagagtatg
tctctggactcgcctgctcccaaccatattgttagtgaaattaagagggagcccttgacc
agagcaaggagtgaggagatgggtaggagtgtgccaggccttcctgacggttggatgaag
ttccttgacacagtgacggggacctaccgatactaccattccccaaccaaccgtgtccac
ctgtaccctcctgaggtcactgttccccagaccccaccctccacaccaccgacagtcaaa
cagaaaccaccacaaccagctgagccagacactaaccgtgaacaagagcgggaacagtct
aaactgaaacgctcctactcctcccctgatatcagccaggacctgagagaggaggcccag
aagaaggccaccgccccgaccactgctgctgtcatacccaccatcaacagagagaccaaa
ccagccattgctaaagcctattctaaagtggagattgcacgaccatcggctgccaaaatt
cgcaacctgaatcctacatttggtggtctgggtgcatcactgactggccttcgtaacatg
ggcaacacatgctacatgaactccatcttgcagtgtctgtgtaacactcctgctatggct
gagtacttcaacaacaactactacctagaggacatcaacaggtccaacatccttggtcat
aaaggggaggtggcagaggagtttggtgtgatcatgaaggccctgtgggccggtctgtac
aagtgcatcagcccacgggactttaagatcaccataggcaagataaatgaccagtttgct
agctatgaccagcaagactcccaggagctgctgctgttcctcatggatgggctccatgag
gacctcaacaaggcggacaacaggaagcggtacaaggaggaggaaaacgaccatctggat
gatcagacggcagctgacctggcctggagcaaacacaagctgctgaacgagtccatcatt
gtagcactgttccaggggcagttcaagtccactgtacagtgtatgacctgccatcgcaag
tcacggacatttgagacctttatgtacctgtcgctgcctctggcctccaccagcaagtgc
tccctgcaggattgtctgagactcttctccaaggaagagaagctgaccgacaacaacaag
gtgttctgcagacactgtaaggcccacagagactccaccaagaaactggaggtctggaag
gtcccacccattctcctggtgcacttaaaacgattctcctatgagggtagatggaagcag
aagctgcagacgtctgtagacttccctctagacagtctggacctgggccagtatgtcatt
ggacccaaacagaacctgaagagatacaacctttatggagtttctaaccactacgggggt
ttagatggcggccattacacagcctactgtaagaacgccctcaaacagcgctggtacaag
tttgatgaccacgaggtgtctgatatctccacctcctccgtcaagtcctccgcagcctac
atcctgttttactccaccttgtga
DBGET
integrated database retrieval system
