Siniperca chuatsi (mandarin fish): 122877042
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Entry
122877042 CDS
T08948
Symbol
cux2b
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein cut-like 2
KO
K09313
homeobox protein cut-like
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122877042 (cux2b)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
122877042 (cux2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Pox_F11
HNF-1_N
Motif
Other DBs
NCBI-GeneID:
122877042
NCBI-ProteinID:
XP_044054071
LinkDB
All DBs
Position
LG5:complement(8463644..8541155)
Genome browser
AA seq
1550 aa
AA seq
DB search
MGGDRRNLSRALSLLHQEGADWDPKASEWLQERELNSVASELAGRQEESEHSHKHLVELS
REFKRNVPEEVREMVAPVLKSFQAQVVALNKRSKEAESAFLGIYKQLIEAPDPAPVLEAS
HTLEERLQHFQSSAPDSEALVREISGHWKKHLECLEKTEPPEDGAAASGAAVTEEAPESS
SPACLMTPNSTLAPGAPGSPQQNYQDRAEGRGEEEESADVSLADRLSEAEEKIKVLHSSL
NTAQTELLDLRCKYNQEMTNKAEEVDAIMANLEKANQRAEVAQREVERLKEQLASGQSAT
TGNCHPAEGTSRNEKGEMLPSQLEAALLAKDREILRLLENIQRLQFTLQEVQETSANQLL
ELERQLAYKTEAIERLEAKLQSQMDYEEIKTELSILKVMKLASANGSSSQDSAKAAEALL
LDKEAFLPSHKYLVDKARILHSIDDDQSDDAGRETGRPPGSHSSSSQVDGQASXSPAPPT
LDSSSSSHDLPRPFSVSPCSGDRLSGDHILHKQLLSPHFKKEGLMAFPTALYAAKVALMS
ATQGSAGVGSIDAGLPSDQSESGSSTAGDEDQLDTAEIAFQVKEQLLKHNIGQRVFGHYV
LGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGSITPRI
RTPETGSDDAIRNILEQAKKEIQSQRGGDGKSSLNSSSGRSSNGAGSSSDETIKSILEQA
RREMEAQQHALIEMEACGRAPTASSGVQVERLGPPERSRGLPLPISIKQEEGGCVTVCMA
NPISSPQTPLSVLSPAAFVQNIIRKVKSEIGEAGTYFDQHWSQERGSMVLGGGGSSRPFN
SVSPSLSSSSSGPSALPRPWPRLENSEGLPNSEEASAAEDELGLGRPVEVKVESDTSVSG
ESPGPGPGRLSYYPAYIPRALKPTVPPLTPEQYEMYMYREVDTIELTRQVKEKLAKNGIC
QRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLDQLGQSLSQPPNQGH
AQEKSPVTAQSSPSPPPSPAESHPSPLVEPVSLCLESSKENQQPESLGLGLPPHPEGGKS
TPSLMALHQPTNPLGIQELVAMSPELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGS
VSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRAMKKMEKKAYLKRRYGLLSTG
SDSDSPSTRSECVSPALASLDLCPYSQVKKPRVVLGAEEKEALRKAYLLEPYPSQNTIEI
LASQLKLKTNTVINWFHNYRSRMRREVLMEGLPDNDTDAEHHSYSPSVTRSPLSDGEERR
LPQPSGHIPSSLPLSANTALPHVKQEATDREDEGEEGREGSMKQARVQCFSTAVQFPQLK
SEHEDSIAGCREPRMAGQSLRQEEGMSSQAQGLYHVAVSIDGPQRTNQSRHEGEDSGKSP
VDPVSFKASSEPCRSSLEVSLNSPSAASSPGLMMSVSPVPSSSAPISPSLPNPPSTSTNH
SLDPNPLLPFQSPKLNRSTQRRNEKMANLNNIIHRLERAANREETLEWEF
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgggaggggatagaagaaatctgagccgtgcactctcgcttcttcaccaggaaggtgca
gactgggaccctaaagcgagcgagtggcttcaagagagggagctaaactctgtagcgtct
gagctggctggtcgacaagaggagagcgaacattcccacaagcacctggtagagctgagc
agggagttcaagagaaatgtccctgaggaagtccgggagatggtggcacctgttctcaag
agtttccaggcccaggtggttgctctgaacaagcgcagtaaggaggccgagtctgccttc
ctgggaatctacaaacagcttatcgaggccccagatccagctcctgtgctggaggcctca
cacaccctggaggaaaggctgcagcattttcagagttcggcccccgacagcgaggctctg
gtacgagagatcagcgggcactggaagaaacaccttgagtgccttgaaaagacagagccc
ccagaggacggtgcagcagcctcaggggcagcagtgacagaggaggccccagaatccagc
tctccagcctgcctgatgacccccaacagcactctggctcccggggccccaggctcccca
cagcagaactaccaggaccgagctgagggccgaggggaggaggaggagagcgccgatgtt
agtttggctgacagactctcagaggctgaggagaagatcaaggttctgcattcatctttg
aacactgcacagacagagcttctagacctgcggtgtaaatacaaccaggagatgacgaac
aaggcagaggaggtcgacgccatcatggcgaatcttgagaaagcaaaccagagagcggaa
gtggcccagagggaagtggagaggctaaaggagcagttagccagtggccagagtgccacc
acagggaactgccatccagcagagggcactagcaggaacgagaagggcgagatgttgccc
tcccagctggaggccgccttgctggctaaagaccgcgaaatccttcgtcttcttgaaaac
attcagcggctgcagttcacactacaggaagttcaagagacctcggccaatcagctccta
gagctggaacgccagctggcctataagacagaagctatcgagagattagaagctaaactg
caatcccagatggactatgaagagattaaaactgaactcagtatcctaaaggtaatgaag
ctggcttcagcaaatggcagctcgtcccaggattctgccaaggctgcagaggctcttttg
ctggataaagaggcctttcttccatctcacaaatacctggtggataaggcccgaattttg
cacagcattgatgatgaccagtctgatgatgcaggtagggagacaggcaggccgcctggc
tcccactcatcctcctctcaggtggatggccaagcctccnccagccccgccccccccacc
ctggacagctcctcctccagccacgatctaccccgtcccttctccgtgtcgccgtgctcc
ggggacagactgtcaggggaccacatccttcacaagcagctcctttccccacactttaaa
aaggagggcctcatggcttttcccaccgccctctatgcagccaaagtcgccctcatgtca
gccacccaagggtctgcaggggtgggcagcatcgacgctggcttgcccagcgaccagtca
gaaagcggcagctcgactgcaggagacgaggaccaactggacacggcagagatcgccttc
caggtgaaggagcagctgctgaagcataacattggccagcgtgtgtttggccactatgtg
ctgggcctctcccagggctcggtcagcgagatcctggcaagacccaaaccttggaggaag
ctgactgtgaaaggcaaagaacctttcattaagatgaagcagttcctctctgatgaacag
aacatcctggcacttaggaccatccaggtccgccagagagggagcatcactccgcgcatc
cgaactcctgaaactgggtcagacgacgccattaggaatatcctggagcaggccaaaaag
gagatccagtcccagaggggaggtgatggcaagtcatctctgaacagctcatcaggcaga
agcagtaacggggcaggtagcagctctgatgaaaccataaagagcatcctagaacaggcc
aggagggagatggaggcccagcaacacgccctgatagagatggaggcctgcgggagggcc
ccgactgccagctcgggagttcaggtagagcgtctggggcccccggagcgctccaggggc
ctgcctttacccatctccatcaaacaggaggaaggaggttgtgttacagtctgcatggcc
aaccccatcagcagcccccagacgcccctcagtgtcctctcccctgccgccttcgtccag
aacatcatccgcaaagtcaaatcagagatcggtgaagcgggcacctacttcgaccagcac
tggtctcaggagcggggctcaatggtgcttggtggcggaggtagctctcgacccttcaat
tcagtctctccctccttgtcttcctcctcctccgggccctccgccttgccccggccctgg
ccccgtctggagaacagcgagggtctcccaaacagcgaggaggcctctgctgctgaggac
gagctggggctgggccgaccagtggaggtgaaagtggagtcagacacatcggtaagtgga
gagtctcctggccctggtcccggaaggctttcctactacccagcgtacatcccccgtgcc
ctcaagcccaccgtgccccctctgactccagagcagtatgagatgtacatgtaccgagag
gtggacaccattgagctgaccaggcaagtgaaggagaagctggcaaagaacggcatctgt
cagaggatctttggtgaaaaggtgctggggctttctcagggcagcgtgagtgacatgctg
tcgcggcccaaaccctggagcaagttgacccagaaaggcagggagcccttcatccgcatg
cagctgtggttactggatcagctaggccagagcctcagccaacccccgaaccagggccac
gctcaggaaaaaagcccagtgacagcccagtcctcgccctccccgcctcctagtccagca
gagagccacccaagtccgctggttgagcctgtcagcctctgcctggagagcagcaaggag
aaccagcagcccgagagcctgggcctggggttgcccccccacccagagggagggaaatcc
actcccagcctcatggccctgcatcagcccacaaacccactgggtatccaggagctggta
gccatgtctccggagctagacacctacgccatcaccaagaaggtcaaggaggtgctaaca
gacaacaacctaggccagcgtctttttggggaaaccatcctgggtctgactcaaggctca
gtgtcggacctgctctccaggcccaaaccatggcacaaactcagcctgaaaggcagggag
ccgtttgtccgcatgcagctgtggctcaatgatcctcacaatgtagacaagctgagggcc
atgaagaagatggagaagaaagcttatctgaaaaggcggtatgggctgctgagcaccggc
tcggacagtgactcacccagcactcgttctgagtgtgtgagtccggccttggcctcgctg
gacctgtgcccctacagccaggtgaagaagcctcgggtggtgctgggagctgaggagaaa
gaagccctgaggaaggcctacctcctggagccctacccctctcagaacaccatcgagata
ctggcctcccaactcaaactcaaaaccaacactgtcatcaactggttccacaactacagg
tccaggatgcgacgggaggtgctgatggagggtctgccagacaatgacacagatgctgag
caccacagctactccccctcagtgacgcggagccccctctctgatggagaggagaggagg
ctgccgcagccctcaggacacatcccctccagccttcctcttagcgccaacaccgcactg
cctcatgtcaaacaggaggcaacagacagagaagacgagggggaggagggaagggagggc
tccatgaaacaggcgagagttcagtgtttttccacagcagtacagtttccgcagttgaaa
agcgagcatgaggactccatcgctggctgccgcgagccccgcatggctggccagagcctg
aggcaggaagaggggatgagcagccaggctcaggggctctaccatgtcgcagtctccata
gacggtccccagagaaccaaccagtccaggcacgagggggaagactccggaaagtcacct
gttgacccggtcagcttcaaggcttcgtcagagccctgccgcagcagcctggaggtctcc
ctcaactccccctctgctgcatcctcacccggcctcatgatgtcagtctcccccgtcccc
tcctcctctgctcccatatcgccctcgctgcctaacccgccctcaacgagcaccaatcac
agcctggaccctaacccactccttcccttccaaagtcccaaactcaacagaagcactcag
agacgcaatgagaaaatggccaacctcaataacatcatccacaggctagagagggcagcc
aatcgagaagaaacactggaatgggagttttaa
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integrated database retrieval system
