Siniperca chuatsi (mandarin fish): 122877069
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Entry
122877069 CDS
T08948
Symbol
lrp13
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122877069 (lrp13)
Membrane trafficking [BR:
schu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122877069 (lrp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
SGL
EGF_LRP2
hEGF
Motif
Other DBs
NCBI-GeneID:
122877069
NCBI-ProteinID:
XP_044054120
LinkDB
All DBs
Position
LG5:8769659..8782120
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AA seq
1357 aa
AA seq
DB search
MGGRLFLCAVLLQLSGHLQVVSAGSGPLKCGLGSKLCDDGSDCVFYSHVCDGEPDCRDGS
DEVDCASGCNEDQFQCAHGKKCIGKDQVCDGTPQCQDRSDELQCSEQTEGCVHQCDSKSR
CLPANFLCDGEKDCLDGTDEANCEDQEEDGHEKEAGTTPSVGSSTTIKCPLGSKPCKDMA
ECVLYNHICDGEADCRDGSDEEDCLPCEADQFQCAHGKKCIERSQVCDGVHQCQDRSDEQ
GCAKHMDGCSHQCDDNSRCIPNSFLCDGERDCWDGSDEANCADEGCSATEFKCTSGQCVS
ATMRCDGHPDCWDRSDEESCTNAPVCTTKHRCPQSKECLVQVWICDGDQDCKDGTDEKDC
PVVPLNCGEFQWPCKSKSKCIPTSWRCDGMKDCDDSSDETECGVETCLPNQFQCGSQECL
DPVLVCNDITDCADGSDEGGSCRINCADADNSRCSQSCYSTPQGMRCRCAAGFRLMEDGL
TCADIDECEGQNPGVCSQLCINTPGSYQCDCHPGYIMEAGGHHCKITGEPFLLSSVQTDL
LLFGLRSGSLDMLSSSAKKAILSLDYDWREQRVFWVSLDTDSIRWSSLDQKTTGTLIKGV
RADSVAVDWLGRNLYWIDGVNSQIVAIRLATPTVKSMDHSVILDEDLDQPRSLALLPQKG
LMFWTEIGNVVKIERAGMDGSERMAVVNSSLGWPGGVAVDTISDRVYWTDERLRAIGSAT
LDGDDIRILQMKETTNPFSLAVFNDMLYWSDAKKRVVQAVNKISGKNRQVLLKRPRQPFG
VKIIHPLLQMGIESPCDKMDCSNMCVLAPGPKAVCKCPSGLLLAEDGLTCSSLFNSAFIL
MLSPSTVTQIYLQSRHTAAALKGWPEHVALQVPSVNEAAIMDYSIRDHTLFLADDGTTSL
SSFKLKDSNLFSQGQRLKLLGDTITAMALDWATLNIYWSSNKQPRLQVTSFKAAHTAVLI
KEGIGRVESIALHPPSGRVCFTNLGLQGSGTVATIECANMDGAEQSVVWKDAVQPTSLEF
SSNGDTIYWADTGLGTIGSVQLDGSGYRELKTGDGLAAVAPTDDTLLWMTVSDKTRLWYR
DEQQQNKLWFEVGTEVVSLKAFSKSSQTGSNQCTENNGNCQHLCLATPGGRTCKCTHDHI
LVNATHCSPEQHCPGGSRPCLDQLSCQPVEKFCNGHVDCYDHSDENCISLKRWSGAKVPA
PTQPRSSSFSPSRSPLLLSEDTGLNTTLNVSSQLRNLDTQHCSQRRCSGNGACVDTNGET
ACVCSLGYRGDSCQDHFLNTMQGPIIYSAMGLCAGVVFIVVMAVVVKKRSANTRIVSPEA
EKETSMTDLDNKDKTTPSTQTAPADMDKPEEVVSSVD
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacgtttgtttctttgtgcagttctgttgcagttgtcagggcacttgcaagtt
gtttcagcaggaagtggtcctttgaagtgtggcctgggctctaaactgtgcgacgatggc
tcagactgtgtcttctacagccatgtgtgtgatggagagcctgactgcagggatggttca
gatgaagtggactgtgcatcaggatgcaatgaagatcagttccagtgtgcccatgggaag
aagtgtataggcaaggaccaggtgtgtgatggtacacctcagtgtcaggaccgttctgat
gaactgcagtgttcggagcaaactgagggctgtgttcaccagtgtgacagcaagagtcgc
tgcttgcctgcaaacttcctgtgtgatggcgagaaggactgtttagacggcacagacgag
gccaactgtgaggaccaagaggaagacggacatgaaaaggaggctgggactacgccctct
gttggctcatcgaccaccatcaagtgtcctttgggctctaaaccctgcaaggacatggca
gagtgtgtcctctataaccacatctgtgatggagaagcagactgcagagatggctcggat
gaggaagactgcttaccatgtgaagcagaccagttccagtgcgcccatggaaagaagtgc
atagagcggagccaggtgtgtgatggcgtgcatcagtgtcaggaccgctcagatgaacag
ggatgtgcaaagcacatggacggctgctctcaccaatgtgatgacaatagccgctgcatt
cctaacagcttcctctgtgacggggagagggactgttgggatggcagtgacgaggcgaac
tgtgctgatgagggctgcagtgccactgagtttaagtgtaccagtggccagtgtgtgtcg
gccacaatgcgttgcgatggtcacccagactgctgggaccgctcagatgaggagagctgc
accaacgcacctgtttgcaccaccaaacaccgctgcccccagagcaaggaatgtctggtg
caggtctggatctgtgatggagatcaggactgcaaagatggcacagatgagaaggattgt
cctgtggttccactaaactgtggtgagttccagtggccatgtaaatcaaagtccaagtgt
attcccacatcctggaggtgtgacggcatgaaggactgtgacgatagcagtgacgagact
gaatgtggggtggagacatgtctccctaaccagttccagtgtggcagccaggagtgcctg
gatccagtcctggtgtgtaacgacattaccgactgcgcagacgggtcagacgagggaggc
agctgccggataaactgtgcagatgcagataacagccgctgctctcagagctgctacagc
acgccacagggaatgcgttgtcgctgtgcagcagggttcaggctcatggaggatggccta
acctgtgctgatattgatgagtgtgaaggccagaacccaggggtgtgcagtcagctgtgt
ataaacactccaggctcataccaatgtgactgccacccaggctacataatggaggcaggt
ggacaccactgcaagatcactggtgaacccttcctgttgtcatcagtccaaacagacctc
ctcttgttcggcctgcgcagtggcagcctagatatgttgtcttcatctgccaagaaggcc
atcctctccctggactatgactggagggagcagagggtcttctgggtcagtctggacact
gatagcatcaggtggtcctcgctggaccagaaaaccacaggaactctgattaaaggtgtc
cgggctgattctgtagctgtggactggctcgggaggaacctgtactggattgatggtgtc
aacagtcagattgttgccatcagactggccacccccactgtgaagtcaatggaccacagt
gtcatcctggatgaagacctggatcagcctcgctctctggcactgctgccacaaaaaggg
ctgatgttctggacagagattggtaatgtagtgaagatcgagcgtgctgggatggatggg
tcggagaggatggcagtggtgaactccagtctgggctggccaggcggtgtggctgtggac
accatctctgacagagtctactggacagatgaaaggctgagggcgattggctctgcaaca
ctggatggagatgacattcggattctacagatgaaagagaccaccaacccattctccctg
gctgtgttcaatgacatgctctattggtctgatgccaagaagcgagttgtgcaagctgtt
aataaaatttctggcaaaaaccgccaagttctcctgaaaagacccagacaaccttttggt
gtgaagatcatccacccattgctccagatgggcattgagagcccctgtgacaagatggac
tgttcaaacatgtgtgtgttggccccgggacccaaggctgtgtgcaagtgtccctctggt
ctcttactggctgaggatggcctgacctgctccagcctgttcaattcagcgttcatactg
atgctgtctccctccactgtcacccagatctacttgcagtcccgacacacagcagcagca
ctgaagggctggcctgaacatgtggccctgcaggtgcccagcgtcaatgaggcagcaatc
atggactacagcatacgtgaccacaccctgttcttggcagacgacggcacaacttcactc
agctccttcaagctgaaggactcaaacttattctctcagggccagcgtctaaaactcctg
ggcgacaccatcactgccatggccctggactgggcaacacttaacatctactggagcagc
aacaaacagccccgcttgcaggtcacctccttcaaggctgcgcacactgctgttctcata
aaggaaggtattggtagagtggagtccatcgccctccaccctcccagtggaagagtttgt
ttcaccaacctgggcctgcagggttcaggtaccgtggctactatagaatgtgccaacatg
gacggtgctgagcagagtgtggtgtggaaggatgctgtccagcccacatctctggaattt
tccagtaatggagatacaatttactgggctgacacaggtttagggaccattggctctgtc
cagcttgatggctctggatacagagagttgaagactggtgatggcctggctgcagtggct
ccaactgatgatacactgctctggatgactgtcagtgacaagaccaggctctggtacaga
gatgagcagcagcaaaacaagttgtggtttgaggtcggcacagaagtggtcagcttaaag
gcgttcagcaagtccagtcagactggttcaaatcagtgcacagaaaacaacggcaactgc
cagcacttatgcctcgccaccccaggaggtcgaacatgcaagtgtacccatgatcacatc
cttgtgaatgccacccactgcagcccagagcagcactgcccagggggtagcaggccctgt
ctggatcaactctcatgccagcctgttgagaagttctgtaacgggcatgttgactgctat
gaccactcagatgagaactgtatcagtctgaagcggtggtcaggagccaaggtccctgct
cccacacagccccgcagctcctctttttctccttctcgctcacctctccttctctctgaa
gacactggtctgaacaccaccctgaatgtaagcagtcagctcaggaacctggacacccag
cactgcagccagagacgctgcagtggcaacggagcctgtgtggacaccaatggagagact
gcatgtgtgtgttccctgggctacaggggtgattcctgtcaagaccatttcctgaacacc
atgcagggtcccatcatctacagcgccatggggctctgtgcaggagtggttttcattgtt
gtgatggcggtggtggttaagaagaggagtgccaatacaaggatagttagcccagaagca
gagaaggaaacgagtatgactgacctggacaacaaagataagaccacccccagtacacaa
actgccccagcagacatggacaaaccagaggaagtggtatcttctgtggactga
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