Siniperca chuatsi (mandarin fish): 122877234
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Entry
122877234 CDS
T08948
Symbol
gtpbp3
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial isoform X1
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schu03016
]
122877234 (gtpbp3)
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
122877234 (gtpbp3)
Prokaryotic type
Methyltransferases
122877234 (gtpbp3)
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
RsgA_GTPase
FeoB_N
Dynamin_N
cobW
GTP_EFTU
DO-GTPase2
MMR_HSR1_Xtn
FtsK_SpoIIIE
ABC_tran
Get5_C
Motif
Other DBs
NCBI-GeneID:
122877234
NCBI-ProteinID:
XP_044054446
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Position
LG6:complement(9991328..10012140)
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AA seq
533 aa
AA seq
DB search
MSVSKYMKRLVEYLYIIMLPSIYHGIWRAAVHTLRTRGSPPCRFLSTSDGVPVGLADAET
IFALSSGHGRCGVAVVRVSGPASATALRSMAGLTRSLPPPRTALLRRITDPQSKEVLDRG
LVFWFPAPHSFTGEDSVEFHIHGGPAVITAVLQALGSVPGMRPAEAGEFTRRAFQAGKLG
LTEVEGLGDLIHAETEAQRRQALRQMSGELGRLYQDWSHKLKRCLAHVEAFIDFSEDELI
EDGVLNQVDRSVCDLQAEMEQHLKDERRGERLRSGVQVVIAGATNAGKSSLLNTLCQRPA
AIVSPIAGTTRDVVETALDIGGFPVLLSDTAGLRDSPDLVEREGVRRARERVEQADLTLV
VVDCAHLPSGAQQATAFLQGHLRSVLPTQEQPDTVFPANRFLLVLNKTDLLPQEQRQALD
GELRRCSGLPPVCLISCHTNEGLQDFLTVLHSSVKTLCGDPLSGAPTLTQARHRVHLQQC
FAALVQYQRYRDIDLALAAEGVRLALTSLGRITGRVGAEEILDIIFKDFCIGK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtctccaagtacatgaaacgtttagtagagtatctttatataattatgctgcca
tccatttatcacggcatatggagagctgctgtccacacactgaggacaagaggaagtcca
ccttgcagattcctgtccacctccgatggagtcccagttggactggctgatgctgagacc
atctttgcattatcatcaggtcatggcaggtgtggggtggctgtggtacgagtcagtggt
ccagcctcagctacagctctgaggtctatggctggactcacacgcagcctgcctcctcca
cgcaccgccctgttacgcagaatcacagatccccaatccaaagaagtgctggaccgcgga
cttgtcttctggttcccagctcctcacagtttcacaggagaggacagtgtcgagttccac
atccacggcggccctgctgtcattactgctgtcttacaggctctaggaagtgtgcctggc
atgaggcctgctgaagctggagaattcacacggagagcctttcaagcagggaaactgggt
ttaacagaggtggaggggctcggagatctgatccatgctgagaccgaggctcagaggaga
caggctctcaggcagatgtcaggagagctgggacgcctttatcaggactggagccacaaa
ctgaaacggtgtctggctcatgttgaggccttcatagacttcagtgaggatgagctcatt
gaggatggggtcttaaaccaagtggacagatcagtgtgtgatctacaagcagagatggag
caacatctaaaagatgagaggaggggcgagcggctacgcagtggagtccaggtggtcatc
gcaggagccaccaatgcagggaaaagtagcctgcttaacacactctgccagcgacctgca
gccattgtgtctcccattgctggcaccaccagggacgtagtagagacggcactggacatc
ggcggattccctgtcctcttgagtgacacagccggtctccgagacagcccggacctggtg
gagagagagggggtccgccgagctcgggaaagagtggagcaggcagatctgactctggtg
gttgtggactgtgctcatctcccatctggtgcacagcaggcgacagccttccttcaggga
cacctcagaagtgtcctgcccacccaggagcagcctgacacagtatttcctgccaacagg
tttctcctggtgctgaataaaactgacctgttgcctcaggagcagaggcaggcgctggat
ggggagctgagacggtgctctggactccctcctgtttgtctgatctcttgccacactaat
gaaggactgcaggacttcctcacagtgctgcacagtagtgtcaagactctgtgtggcgat
cctctgtctggtgcccccaccctgacccaggcccgccacagggtccacctgcagcagtgt
tttgcagccctggtccagtaccagcggtaccgtgacatcgacctcgctctggcagccgag
ggtgtccggttggctctcaccagcctaggccggatcactggccgggtcggggctgaggag
atcctggatatcatcttcaaagacttctgcattggaaaatag
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