Siniperca chuatsi (mandarin fish): 122877237
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Entry
122877237 CDS
T08948
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122877237 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122877237 (hnrnpm)
Spliceosome [BR:
schu03041
]
Common components
Common spliceosomal components
hnRNP proteins
122877237 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_MARF1
RBD_DEAH11
Lipoprotein_18
DUF7552
Motif
Other DBs
NCBI-GeneID:
122877237
NCBI-ProteinID:
XP_044054454
LinkDB
All DBs
Position
LG6:16008577..16017587
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AA seq
691 aa
AA seq
DB search
MSNEQAENATETVGQQQQQPPPPPQQQQQQQQQQGDVNGKAKHEPNSSRKERPQKRGGGG
RYEPYGNVNKRYRVFVSNIPYDVKWQALKDLMKEKVGEVTYVEHLMDAEGKSRGCAVVEF
RTEELMKKAVEKVNKHNLNGRPLKVKEDPDGVIAQREINKAQGGGPPGGHGGMGGMGGMD
RMNMDRMGPGPNGPMVNIPPSLMNNPNIPNEIIHGLQAGRIGSTVFVANLDYKVGWKKLK
EVFGMAGMVVRADILEDKDGKSRGMGTVTFDMPLEAVQAVSMFNGQLLFNRVMHVKLDEK
SLPKDFGPPDRAAALPRGLSGIGLGLGPGGQPIDAAQLNRGGGGMGNMGPGGMDGMGGFG
NMGGRMGGGMDNFGGMNNMDRFGSAGMGRMNEMDRGIGGAFDREFGRNEMGMSRNNFGDS
FERGMGNSLGMDRMSSGMDRLGAGMDRMAGMDRMGMDRMDRVSDLDRLGSGFDRMGSGMD
RLGPSMDRLGPGLDRMSSSMDRLGPAGFDRLGPSGLDRMGSGLDFGSPMGMDRMGNTGLD
RMASSFDRIGSTGGLDRFPAGGLDRMSSGMDRMGSGGVGGQFDRSADLDRGFGGNSFGGT
AGPGSGGGNVRKGCQIFVRNLPFDFTWKMLKDTFNTCGMVQYADIKMENGKSKGCGVVRF
DNPETAERACRTMNGYRLNGREIDVRIDRNA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgagcaggccgaaaatgctactgagactgtaggccagcagcagcagcagccg
ccgccgccgccgcagcagcagcaacagcaacagcagcagcagggagatgtgaatgggaaa
gccaagcatgagcccaactccagcagaaaggagaggccccagaagagaggtggaggcgga
cgctacgaaccctatggaaatgtgaacaaaagataccgcgtttttgtcagcaatatccca
tatgatgtgaaatggcaagccctcaaagacctgatgaaagaaaaagtgggtgaggtaacg
tacgtggaacacttaatggacgcagaaggcaaatcgaggggttgtgctgttgttgagttt
aggactgaagagctaatgaagaaagcagtggagaaggtcaacaagcacaacctcaatgga
cgacccctaaaagtgaaagaggatcctgatggtgtgattgctcagagagaaatcaacaag
gctcaaggtggaggccccccaggaggccatggtggaatgggaggaatgggtggaatggat
cgcatgaacatggatcgaatgggccctggaccgaatggccccatggtcaacattcctcct
agcctgatgaacaaccccaacatccccaacgagatcatccatggtctccaggctggcagg
attggcagcactgtctttgtggctaatcttgactacaaagtgggctggaagaagctgaaa
gaggtatttggcatggcgggcatggtggtgagggctgacattctggaggacaaggatggg
aaaagcagaggcatgggcacagtaacatttgatatgccccttgaagcagtccaagctgtc
tctatgttcaatgggcagctgttattcaacagagtcatgcacgtcaaactggatgagaaa
tccctgccaaaagattttggaccacctgacagagcagctgctcttccccgtggcctgagt
ggtattggtttgggcctgggacctggtggccagcccattgatgctgcccaactcaacaga
ggtggtggaggaatgggcaacatgggccctggaggaatggatggaatgggtggctttggc
aacatgggaggtcgtatgggaggaggaatggacaactttggaggaatgaacaacatggat
cgttttggttctgcagggatgggcagaatgaacgagatggaccgtgggattggtggtgct
tttgacagggagtttgggcgaaatgaaatgggaatgtctcgcaataattttggagactcc
tttgaaagaggaatgggaaactccctgggtatggaccgcatgagctctggaatggaccgt
ctgggagcgggcatggaccgcatggcagggatggaccggatgggcatggacaggatggac
cgcgtgtctgacctagataggctgggttctgggttcgaccggatgggctcggggatggac
cggctggggcccagtatggacaggcttggacctggcttagaccgtatgagctccagcatg
gaccgccttggcccagctgggtttgaccgcttaggcccgtctggtttggatcgcatgggt
tctggcctggactttggctccccaatgggtatggatcgtatgggcaacaccgggcttgac
agaatggccagcagctttgaccgcataggctccactggaggactggaccgctttcccgcc
ggtggcctcgaccgcatgagctctggcatggatcggatggggtctggaggtgttggcggt
cagtttgatcgctctgctgacttggatcgcggatttggtggaaattccttcgggggaact
gcagggcctggatctgggggaggcaatgtcaggaagggatgccagatctttgtcagaaat
ctgccatttgacttcacttggaagatgctgaaggataccttcaatacgtgcggcatggtt
cagtatgctgatattaagatggagaacggcaagtccaagggctgtggtgtggttcgcttc
gacaaccctgaaactgctgagcgagcctgccggaccatgaatggctatcggctgaatgga
agagagattgatgttaggattgataggaatgcataa
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