Siniperca chuatsi (mandarin fish): 122877319
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Entry
122877319 CDS
T08948
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122877319 (chd1l)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122877319 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
IBB
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
122877319
NCBI-ProteinID:
XP_044054657
LinkDB
All DBs
Position
LG6:complement(24635767..24647985)
Genome browser
AA seq
1021 aa
AA seq
DB search
MTDISLKIKNSVGEKKKTAMAQSDLKKWGLRGIQLRPYQLDGVQWLTQCLKNQQGCILGD
EMGLGKTCQTISLLVYMSGALGRKGPFLVLSPLSVMENWRKELECFAPCLTVLCYKGDKE
RRAELQRETDAQDFHVLLTTYELCLKDASFLRRWKWKVLVVDEAHRLKNQNSLLHKTLTQ
FLVGFRVLLTGTPIQNNLQELYSLLSFIQPSIFTADETDDFVNSYSDVQSQPALAAELQS
VLEPFLLRRVKSEVAVDLPKKTELVVYHGMSALQKKYYKAILMKDLEAFGNEQGNKNQLL
NILMNLRKCVDHPYLFDGVEPEPFEMGEHLVEASGKLCLLDSMLTYLHKGGHRILLFSQM
TRMLDILQDYMEYRGYSYERLDGSVRGEERNLAVKNFSNKEIFVFLLSTKAGGVGLNLTA
ADTVIFMDSDFNPQNDLQAAARCHRIGQNRPVKVIRLLARDTVEEIMYSRAVSKLHLTNT
VIEEGRFSLLDQAQSAAAGLQLSEILKFGIDKLLSSEESSVQDVKLEKILGPSRDGLWLD
DEDFTSLREEEEEEGNGSESDGQNHMYYFEGKDYSKDPSSEDQKSFDCLLKEQLAEFQRA
AGEGRALRHKAGVSLSVALEIPTRKRKPLTEAELELRRQRREEAAAKRAKIEEDVKKKQQ
EQKYKKKMAWWESCGYRSLSLPSLSVDSEEEEQQEEDDSSVCSTGSDSTAIHYVLGDVTH
PHAAQGDAIIVHCVDDAGRWGRGGLFTALEVRSDEPRKRYELAGKMKDLDLGNVLLFPID
DKQSRLDGQDQLALIVTQQRDKANNLSGILLTALDEGLKKIYASAKRNKASVHLPRIGHA
TKGFNWYGTERLIRKHLASRGIPTFIYYHSRTAKNTAPPQTSTPATLMSTSSPEPQLHNS
DRLTEEMDAETPSPSAPLQSPGPAELPSFMRGVCVFFYNLPASERKRLGRYLITYDGDEE
EIMSPEVTHIVAEVENSIHSQELQDLVREYTQAVPVQKAWLESCFSKQRKVNTALFLHPL
R
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgacagacatttcgttgaaaataaaaaatagcgtaggagagaaaaagaagacggctatg
gcgcagagcgacttgaagaagtggggtttaagagggatacagctgagaccttaccagctg
gatggcgtacagtggttaactcagtgcctgaagaaccagcagggatgcatcttaggagat
gagatgggtctgggaaaaacctgtcagacgatctctctgctggtgtacatgtcaggagct
ctcgggaggaaaggtccgttcttggtgctgagcccgctctctgtcatggagaactggagg
aaggagttggaatgcttcgccccctgtctgactgtgctgtgttacaagggagacaaagag
agacgggctgaacttcagagggaaacagacgcacaggactttcatgttctgctcactaca
tatgagctgtgtctcaaagatgcttcgttcttgagacgttggaagtggaaggtgcttgtg
gtagatgaagctcacagactgaagaatcagaattcactactgcacaaaaccttgacacag
ttcttagttggtttcagagtcctgctgacagggacccccatccagaacaacctgcaggag
ctctactccctactgagcttcattcagcccagcatctttacagctgatgagacggacgac
tttgtcaactcttactctgatgtacaaagccaacctgctcttgccgctgagctgcagagt
gtcctggagcccttcctgcttcgtagagtaaagtcagaagtggctgtggatctgccgaag
aagacagagctggtggtgtaccacggcatgtcggctctgcagaaaaaatactacaaagcc
attctgatgaaggatctggaggcttttggaaatgagcagggcaacaagaaccagctgttg
aacatcttgatgaacctgagaaagtgtgttgaccacccatacctgtttgatggggtggaa
ccagagccttttgagatgggggagcatctcgttgaagccagtgggaaactttgccttttg
gacagcatgctgacttaccttcacaaagggggccatcggatcctgctgttctctcagatg
acgaggatgctggacatacttcaggattacatggagtacagaggttatagctatgaacgt
ctggatgggtccgtccgaggggaagaacgaaatctagcagtgaagaacttcagcaacaaa
gaaatatttgtctttttactcagcactaaagcagggggagtgggcttgaaccttacagct
gctgacacggtcatttttatggacagtgatttcaaccctcaaaatgacctgcaggctgct
gcacgctgccatcggattggtcagaacaggcctgtgaaagtgatccgtctactggcaaga
gacactgtggaggaaataatgtactctcgggctgtgtccaagttgcacctcaccaacact
gttattgaagaagggcgcttctctttgctggaccaagctcagtcagctgctgcaggactg
cagctaagtgagatcttgaagtttgggatagataaacttttgtcatcagaagagagctct
gtgcaggatgtgaaactggagaagatcctcggtccatcacgtgatggtctgtggctggat
gatgaagacttcacctctctcagggaagaggaagaggaggaagggaacggctctgaatct
gacgggcagaaccacatgtattactttgaggggaaagactacagtaaggaccccagctct
gaagaccagaagagctttgactgtttgttaaaggagcagctggccgagttccagagagct
gcaggagagggacgagctctacgacacaaagctggagtttcactatcagtagcccttgag
attccaacgaggaagaggaaacctcttactgaggctgagctggagctgaggcgccagaga
agggaggaggctgcagccaagagagccaaaattgaggaggacgtgaagaagaagcaacaa
gagcagaaatacaagaaaaaaatggcatggtgggagtcgtgcggctacagatcactgtcc
ctgccttccctgtctgtggacagtgaagaagaagaacaacaagaagaggatgacagcagc
gtatgctccacaggctctgacagcacggccatccactatgttctgggggatgttactcat
cctcatgccgctcagggagatgctatcatcgtccactgtgttgatgatgcaggccggtgg
ggcaggggaggcctctttacagctctagaggtgagatcagatgaaccacgaaaaaggtat
gagttggctggcaagatgaaagatttggaccttggaaatgtgctgctcttccccatcgat
gacaaacagtccagattagatggccaggatcaattggctctgatagtgacacagcaaaga
gacaaagcaaacaacttgtctgggatccttctaactgctctggacgaaggtctgaaaaag
atttacgcttcagccaaaaggaataaggcaagtgtacatcttcctcgcatcggtcacgcc
accaaaggcttcaactggtacggcaccgagaggctcatcaggaaacacttggcatccaga
ggcatcccaacatttatatactatcacagcagaacagcaaagaacacagctccacctcag
acatccacccctgcgaccttaatgtcaacatcctcccccgaaccgcagttgcataactca
gacaggttgactgaggagatggatgcagaaacccccagcccctctgctcccctccagagc
cccggccctgcagagctccccagtttcatgaggggggtctgtgtgtttttctacaacctg
cctgcatcagagaggaagaggctgggccgctaccttatcacttatgatggagatgaggag
gagatcatgagtccggaggtcacccacatagttgcagaggtggagaacagcatccactca
caggagctccaggatctggtgcgtgagtacactcaggctgtccctgtgcagaaggcctgg
ctagagtcctgcttctccaaacaacgaaaagtcaacactgcactgttcctacatccgctc
agataa
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