Siniperca chuatsi (mandarin fish): 122877403
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Entry
122877403 CDS
T08948
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04810
Regulation of actin cytoskeleton
schu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122877403 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122877403 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122877403 (cyfip1)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122877403 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
122877403 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
122877403
NCBI-ProteinID:
XP_044054852
LinkDB
All DBs
Position
LG6:24792960..24825217
Genome browser
AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSVMFQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHTERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCTSIGSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDTEYRKLFDLALQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQITLRDPLRQAIKKKKNVVQSVLQAIRKTVCDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLVADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRADCKNQGANIPWPSSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSIVELEALLDINRMTHKLLSKFLTLDSLDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTILPFSQEFQRDKPPNAQPQYLYGSKTLNLAYSS
IFSSYRNFVGPPHIKVMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAMLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIIALLGQHRRFDILDFSYHLLKVQKHDGKDEVIKSVP
LKKMVDRIRKFQVLNNEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacagtgactttagaggatgccctctccaatgtggacctgctggaggagctg
ccgctgccggaccagcagccatgcatcgagcccctcccctcatcagtcatgtttcagccc
aacttcaacaccaactttgaggaccgcaatgcattcgtcaccggcatcgccagatacatc
gagcaggccaccgtccactccagcatgaatgagatgctggaggaggggcaggagtatgcc
atcatgctctacacctggaggagctgctctcgtgcaataccacaggtgaaatgcaacgaa
cagcccaacagagtggagatctacgagaagacagtggaggtcctggagccggaagtcacc
aagctgatgaatttcatgtacttccagcgtacagcaatcgaccgtttctgcggagaagtc
cgtcgtctctgtcacaccgagcgcagaaaagacttcgtctccgaggcgtacctgctaacc
ctcggcaagttcatcaacatgttcgctgtgctggatgagctgaagaacatgaaatgcagt
gtcaagaacgaccactcagcctacaaacgagctgcccagttcctcagaaaaatgtctgag
ccttcatccatccaggagtctcagaacttgtccatgttcctggcaaaccacaacaaaatc
actcagtctttgcagcagcagctggaagtgattaatggatacgaggagctgctggcagac
attgtcaacctgtgtgtcgattactacgagaacaagatgtacctcacccccagtgagaaa
cacatgctgctcaaagtaatggggtttggcttgtacctcatggatggaaacagcagcaac
atctacaaactagatgccaagaagagaattaacctgaccaagatcgacaagtttttcaag
caactccaggtggtccctctgtttggtgacatgcagattgagttgtcccggtacatcaag
accagtgctcactttgaagagaacaaatccaggtggacttgcacgtctataggcagcagc
ccccagtacaacatctgtgagcagatgattcagatccgcgaggaccatatgcgcttcatc
tcggagctggctcgctatagcaacagtgaggtggtgaccggatcagggcgtcaggaagcc
caaaagactgatactgagtacaggaagctgtttgacttggccctgcagggcatgcagctg
ctctcccagtggagtgctcacgtcatggaagtgtactcctggaaactggttcatccaact
gacaagtactccaacaaggagtgccctgacaacgctgaggagtatgagagagccaccaga
tacaactacacaagcgaggagaagtttgctcttgtggaggtgatggcaatgataaaggga
ctgcaggtgttgatgggacgcatggagagtgttttcaaccacgccatccgtcacaccatc
tactcagctctgcaggactttgctcaaatcactctgcgtgacccactccggcaggccatc
aagaagaagaaaaatgttgtccagagcgtcctccaggccatccggaagacagtgtgtgac
tgggagaccggccgggagccacacaacgaccccgccctccgtggagaaaaagatccaaag
ggtggctttgatatcaaggttcctcgccgtgcagtggggccctccagtacacagctctac
atggtgaggactatgctggagtcgcttgttgctgacaaaagtggctctaagaagactttg
cgcagcagtctggaaggccccaccatcctggacattgagaagtttcaccgcgagtctttc
ttttacacccatctgctgaacttcagtgagaccttgcagcagtgttgtgacctttcccag
ctctggttcagggagttcttcctggagctcacaatgggccgcaggatccagtttcccatc
gagatgtccatgccctggatcctcaccgaccacatcctggagacaaaggaagcatccatg
atggagtatgtgctgtatcccctggatttgtacaatgacagtgcacactacgccctgacc
aaattcaagaagcagttcctctatgacgaaatagaggctgaggtgaacttgtgctttgat
cagtttgtctacaagctggctgatcagatatttgcctactacaagattctagcaggaagt
cttctgcttgacaaacgtttgagagccgactgcaagaaccaaggggccaacattccctgg
ccgtcctccaaccgctacgagacactgctgaaacagcgccacgtccagcttctaggccgc
tccattgatctaaacaggctcatcactcagagggtttcagctgccctttacaagtcccta
gagctggccatcaaccgcttcgagagtgaggacctcacctcaatcgtggaactggaagct
cttctggacatcaaccgcatgacacacaagctcctcagtaagttcttgactctggacagc
ttggacgccatgttccgcgaggccaaccacaacgtgtcggccccctacggccggataaca
ctgcacgtcttctgggagctcaattatgacttcttgcccaactactgctacaatggctcc
accaacaggtttgtgcgcaccatcctacccttctctcaggagttccagagggacaaacca
cccaacgctcagccccagtatttgtatgggtcaaagaccttgaacctcgcgtacagcagc
atatttagctcctacaggaactttgttggtccccctcacatcaaggtcatgtgcagactg
ctgggctaccagggcatcgctgtggtgatggaggagctgctgaaggtcgtcaaaagcctg
cttcagggcaccataatgcagtatgtgaagaccctgatggaggtgatgcccaagatctgc
cgacttccccgccacgagtacggttccccaggtatcctagaattctttcaccaccagctg
aaggacattgttgagtacgctgagctcaagacggtgtgtttccagaacctgagggaagtg
ggcaacgccatgctgttctgtctgctgagcgagcagagtctgtcacaggaagaagtttgt
gatttgctgcatgctgcaccgtttcagaacattcttccaagagtccacgtcaaagagggg
gaacgccttgatgctaagatgaagcgcttggaagccaaatacacagcactgcatttggtt
ccactgatagagcgccttggcaccccacagcaaattgccattgctcgtgagggcgacctc
ctgaccaaagagaggctgtgctgcggtttgtccatgttcgaggtcatcctcacacgcgtg
cgaggcttcttggacgaccccatctggcgtggaccgctgcccagcaatggcgtgatgcac
gtggacgagtgtgtggagttccaccgtctctggagtgccatgcagtttgtgtactgcatc
cctgtgggagcccatgagttcacagtggagcagtgcttcggagacggcctccactgggct
ggctgcatgatcatcgccctcctgggacagcacagacgctttgacatcctcgacttcagc
taccaccttctcaaggtgcagaagcatgacggcaaggatgaggtcatcaagagcgtgcca
ctgaagaaaatggttgacagaatccgcaaattccaagtcctcaacaatgagatttttgct
atcctgaacaagtacctgaagtctggagatggagagaacatgccggtcgaacacgtccga
tgcttccaaccaccgatacaccagtcgcttgccagcagctga
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