Siniperca chuatsi (mandarin fish): 122877416
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Entry
122877416 CDS
T08948
Symbol
slc1a8a
Name
(RefSeq) excitatory amino acid transporter 5
KO
K05618
solute carrier family 1 (glutamate transporter), member 7
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122877416 (slc1a8a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schu02000
]
122877416 (slc1a8a)
Transporters [BR:
schu02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
122877416 (slc1a8a)
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Gene cluster
GFIT
Motif
Pfam:
SDF
DUF373
Motif
Other DBs
NCBI-GeneID:
122877416
NCBI-ProteinID:
XP_044054890
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Position
LG6:complement(1010632..1032306)
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AA seq
578 aa
AA seq
DB search
MEELLLPSGEEEARSEHGSHVPGDAGRTMREGVKTFVRVTAKGDFSRIVRDFFKRNGLLT
LSVIAVLTGCTLGFMLRGTQLSTQAKIYFSFPGELLMRMLKMLILPLITSSLMSGLSSME
SKACCRMGVLTVTYYLWTTFIAVVVGILLVIIIKPGVGTEMESNRLGGGPVMTSADALLD
LIRNMVPSNLIEATFQQYKTDLVPILKVPTKTVQPNFVYVFPDESHPSGRTVYLELTPPP
DITYKTSPGSSQQMNVLGIVVFSATMGLLLGRMGERGAPLVNVCQCINECVMKIINAAVW
YFPFGIVFLVAGKILDMQDPSTLGRKLGWYGITVLAGLFVHGLILLPLFYFILTRKNPFS
YIRGLLQAMVIALATSSSSATLPITMKCLLENCHVDRQIARFVLPVGATINMDGTALYEA
VAAIFIAQVNDYELDFGQLVTISITATAASIGAAGIPQAGLVTMVIVLTSVGLPPDDITL
IVAIDWILDRFRTMINVLGDALAAGIIAHLCRKDFPLSGAGKTVPSYGTQTPHAHNNSHS
VDVPMTEIHTHKDCMFETMGDSAGERHAHTVYYNICQV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcttctgttaccgagcggcgaggaggaggcgcgctccgagcacggttcgcac
gttccaggagacgcagggaggacgatgagggaaggagtgaagaccttcgtccgagtgacg
gcgaagggggacttcagcaggattgtgagggatttctttaagaggaacgggctgctgacg
ctgtcggtcatcgccgtgctcaccggctgcacgctgggcttcatgctgagaggaactcag
ctgtccacacaggcaaagatctacttctcttttcccggagagctgctgatgaggatgttg
aagatgctcattcttcctctcatcacgtccagtttgatgtcgggtctgtcgtcgatggag
tcgaaggcgtgctgtcggatgggcgtcctgaccgtcacctactacctgtggaccaccttc
atcgccgtggtggtcggcatcttgctcgtcatcatcatcaaacccggcgtggggacggag
atggagagcaaccggctgggaggggggcccgtcatgacctcggccgacgccctgctcgac
ctcatcaggaacatggttccctctaatctgatcgaggccacgtttcagcagtacaaaacg
gacctggttcccatcctcaaagtcccgaccaaaaccgtccagccgaacttcgtctacgtg
ttccccgatgagagtcatcctagcggtcggacggtgtacctggagctgaccccgcccccg
gacatcacgtacaagacgagtcccggcagcagccaacagatgaacgtcctcggcatcgtc
gtcttctccgccaccatgggtctgttgctgggcaggatgggagagcgaggagctccgctg
gtcaacgtctgccagtgtatcaacgagtgcgtcatgaagatcatcaacgccgctgtctgg
tactttccgtttgggattgtcttcctggtggcggggaagatcctggacatgcaggacccg
agcactctggggaggaagctgggctggtacggcatcaccgtgctcgccggtctcttcgtc
catggactcatcctcctccctctcttctacttcatcctcaccaggaagaaccccttctcc
tacatccgtgggctgctgcaggccatggtgattgccctggctacctcctccagctctgcc
acgctgcccatcaccatgaagtgtttgttggaaaactgccatgttgaccgacagattgcc
cgcttcgtcctccctgtgggtgccaccatcaacatggacggcacagcgctgtacgaggcc
gtggcggccatctttatcgctcaggttaatgactatgagctggactttggccagttggtc
accatcagcatcacagctacagccgctagcatcggtgcagcggggattcctcaggctggt
ctggttaccatggtgatcgtgctgacatcagtgggcctgccaccagatgacatcacactc
atcgtggccatcgactggatcctcgacaggtttcggaccatgatcaacgttctgggcgac
gctctggcggcgggaatcatcgcccacctctgtcggaaagatttccccctcagtggagca
ggaaagactgtaccgtcctacggtacgcagactcctcatgctcacaacaactcccacagc
gtagatgtgccaatgacagagatccacacccacaaagactgcatgttcgagacgatgggc
gactcagcgggtgagaggcacgcacacactgtctactacaacatctgccaggtgtga
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