Siniperca chuatsi (mandarin fish): 122877438
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Entry
122877438 CDS
T08948
Symbol
trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122877438 (trappc8)
Membrane trafficking [BR:
schu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
122877438 (trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
Ig_TRAPPC9-Trs120_1st
TRAPPC13_C
SNAP
Motif
Other DBs
NCBI-GeneID:
122877438
NCBI-ProteinID:
XP_044054924
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All DBs
Position
LG6:complement(29853926..29923708)
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AA seq
1487 aa
AA seq
DB search
MAQCVQSVQEFVQDSFVPMVAVLCSEEAERVTRKNNLNFAELLRPFCRLTSEGHIRDPNN
QVQVVKNLRICVNNMVTSLSTGSAALSPTQRRLLNEVVLSCQPQEGALTNVITAGDYVLN
FSDHSFKASIPWYSAWRETLLEVSTSKHYTATTPWFETYRENFLQSMPASDHEFLNHYLA
CLLVVSSTEAVPVEQFLKLSQEQHRIQHSGEYTNPKWFIPNTLKYYVLLHDMSEGDEQRA
DTVYEDMKQRYGSQGCYLLKMNSRTFSAEEDEQIPDPWSQYLHRNNLHNQDILDDVAPVV
NSAVENNISAAEVDCHHSTEKDGDSNSLDSHPLQLDTASSSGSLHTLSAVCTDLKKGARD
PENLVGGAASHGACLTLNDHDHIRQFIQEFTFRGLLPHIEKNIRQLNDQLVSRKGLSRSL
FTATKKWFGGGKVPEKSISEPKSTCGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHT
AKKDFLSDQAMLYAAGALEMAAVSAFLQAGAPRPYPAHYMDTAIQTYKDVCKNMVMAERC
ALLSTEILKSQGKYSEAATLLIKMTSEDSDLRSALLLEQAAHCFINMRNPMVRKFAFHMI
LAGHRFSKAGQRRHALRCYCQAMQVYKERGWSLAEDHINFTIGRQSFTLRQPENAIIAFK
QILTNDSRQTATQQGAFLREYLYVYKSVTGVNEVSLPQLPLPCIHSSATRVYFGHERCLA
EGEKQAATHVSLDQEYDQDLAAMWCHLEEQLVAAANHGALPVNFQPTQSCLNSQTDNLRH
PLAVVEEPIIVEVMLRNPLKVSLALSNLSLLWRFTANGAFTLKEKTTEELAGEAITNEET
MTLGMSQKDDIVTTEVILEFHMGPEETKMARLRLLPHRTGQLNIVGVVYNLAAASSGEMA
PSTEGQQTFDLMVVRGSQDLKIQGPRLNQTKEDKMLVRHGPDRRLDPIIIPPMPLMEVFF
LQFPTALLCGEIRKAYVEFCNVSSVALCGLRVASTHPDFFTFGSHATTPLTPLSPTSAEN
CSAYKTLATPPQPASVASEMLVSAEDFSQPSAVIEIPIDGSMLQPGESTQLPLWLRGPDQ
EGVHEINFLFYYESMEKGIKISHRVLRHTVFICASRSLSVQASACRSSVPPHHSLDDKGS
GGTLVFIDVENINTSEAGVREFHIVQVSSSSQHWRLHKCINPAKDKDCKLTSRERAKLCF
RATRCKPHQATSDAVEKYTFADLNLGNERIISSSTPCGDFFFRGCRTSESQRVYVASSRT
SSSSKSQGSVSIEDRASDITNIVKKCNELDLNIIVIWKAYVVEDNKQLILEGQLHVALQT
ISKEASSLTAKEEAQEMVLLKFKSELPPPVVLPSAELSQLIKTNLHYPETYTHPFVQDSL
CVVPVTLTLSNCSLTQVDVIIDLQHKSTSTLESLEVHSLFTWVGQTQYKLQLKPQEVLCL
TLRACFLQAGVYNLNTPRVFAKPAEQGTMCETSQQTASPALIIINNA
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggcccaatgtgttcaatctgtgcaggagttcgttcaggactcgtttgtcccgatggtg
gctgtcttatgtagtgaagaagcggagagagtgactcgcaagaacaacctgaatttcgct
gagttgctgaggcctttctgcagactaacgtccgaaggtcacatccgggaccccaacaac
caagtgcaggttgtgaaaaacctgcgcatctgtgtcaacaatatggtgacgagtctaagc
acggggtctgctgccctcagccctacccagcggcgactgctcaatgaagtggtgttatcc
tgccagccacaagagggtgctctaaccaatgtgatcacggcaggagactatgtcctcaac
ttcagtgaccactcttttaaagctagcatcccctggtacagtgcctggagagaaacactg
ttggaagtcagcacctccaaacactacacagcaaccacgccctggtttgaaacctacaga
gagaacttcctgcagtcaatgcctgcctccgaccatgagttcctcaatcactacctcgcc
tgcctgctggtggtgtcctccactgaggcagtccctgtggagcagtttctcaagctttcc
caggagcagcacaggattcagcacagtggagaatacactaaccccaagtggtttatcccc
aacacactcaagtactacgtcttactgcatgacatgagtgagggggatgaacagagggca
gatacggtatatgaggatatgaaacagaggtatggttctcaaggctgctatctgttgaaa
atgaactctcgtaccttctcagctgaagaagatgaacagattccagacccatggagtcaa
tacctgcacaggaataatctgcataaccaggatatacttgatgatgtagctccagttgtg
aacagtgctgttgagaacaatatcagtgcagctgaagtggactgccatcactcaacagag
aaagacggagattccaacagcctggatagccatcctctccagctggatacagcgagcagc
tcggggagcctccacaccctcagtgctgtctgcactgacctcaagaaaggtgcaagagat
ccagagaacctggtgggaggagcagcgagtcacggggcatgtctgaccctgaatgaccac
gaccacatcagacagttcatccaggagttcaccttcaggggcctactgccacacatagag
aagaacatcagacagctcaacgaccagctagtctccaggaaaggtctgagccggtctctg
ttcactgcgaccaagaagtggtttggtggagggaaagttccagagaagagcatcagtgaa
ccaaagagcacgtgtggccttctatatcccccagaagccccagagctgcagatcaggaag
atggctgacctgtgcttcctggttcagcactacgagctagcctacagctgttaccacact
gccaagaaagacttcctgtcagaccaggccatgctgtatgctgcaggggcactggaaatg
gctgcagtgtcagcctttctgcaggctggagctcccagaccatatccagcacactacatg
gacaccgcaatacagacgtacaaagatgtctgcaagaacatggtgatggctgagcgctgt
gctttactcagtactgagatactcaagagtcagggcaaatactcagaggctgcaactctc
ctcattaagatgactagcgaggactctgacctgcgcagtgctctgctgttggaacaggct
gcccactgttttattaatatgcgtaaccctatggtgcgcaagtttgccttccatatgatc
ttggctggtcatcgtttcagcaaagcaggacagaggaggcacgcactgcgctgttactgc
caagccatgcaggtgtacaaggagaggggctggtctttggcagaggatcatatcaacttc
acaatcggtcgtcagtccttcacacttcgccaaccagagaatgctataatagccttcaaa
cagatcctgaccaatgacagcaggcagacagccacacagcagggcgcctttctcagagag
tatctctatgtctacaagagtgtgacaggggttaatgaagtcagcctcccccagctgcct
ctgccctgcatccacagctcagccacaagggtctacttcggacatgaacgctgccttgca
gaaggggaaaagcaggcagccactcatgtgtcactggaccaagagtatgaccaggatttg
gcagccatgtggtgccacctagaggagcagcttgtggctgctgccaatcatggggccctc
ccagtaaacttccagcccacccagtcctgcctgaacagtcagacagacaacctgcgccac
ccactggctgtggtagaggagccaatcatagtggaggtgatgttgaggaaccctctgaag
gtttctctggctctgtccaacctctcactcctctggaggttcactgccaatggtgcgttt
acattgaaggagaagacaactgaagagttggcaggagaggccatcaccaatgaggagacc
atgactctagggatgtcgcagaaagatgacattgtcaccactgaggtcatcctggagttt
catatgggtccagaggagaccaaaatggctcgactcaggctgctgccacacagaactggc
caactgaacattgtgggtgtggtgtacaacctggctgcagcctcctctggagagatggct
cccagcactgagggccagcagacgtttgatttgatggtggttcgtggcagtcaggacctg
aagattcagggcccacgactcaaccagaccaaagaagacaagatgttggttcgacatggt
cctgatcgccgtctggatcccatcataataccacccatgcccctaatggaggtcttcttc
ctgcagtttcccactgctctgctgtgtggtgagatcaggaaggcctatgttgagttctgt
aatgtcagcagtgttgctttgtgcggccttcgagtggcatccacacaccccgatttcttc
acctttggcagccatgccacaacacccctcacacccctcagcccaacctcagctgaaaac
tgctcggcctataaaaccttggcaacgcccccccagccagcgtcggtggcatctgagatg
ttggtttcagctgaggatttcagccagccatccgcggtgatagagatcccaatagacggc
agcatgctgcagccgggggagtccacccagctgcctctctggctcagaggaccagaccag
gagggagtccatgaaatcaacttcttgttctactatgaaagcatggagaaaggaatcaaa
atcagtcatcgggtgttgcgtcacacagtgtttatctgtgccagtcggtctctgagtgtg
caggcatcggcctgccgcagcagtgttcctccacatcacagtctggatgacaaaggcagc
ggtggaacgctggtctttattgatgtggagaacatcaatacgagtgaagctggtgtgcgt
gagttccacatcgtccaggtgtccagcagcagtcaacactggcgcctccacaagtgtatc
aacccagccaaggataaagactgtaaactcaccagcagagaaagagctaagctgtgtttc
agggccacacgatgcaaaccccaccaagctacctcggatgccgtagagaaatacaccttt
gcagacctgaatctgggaaatgaacggatcatcagttcctccacaccctgtggagatttc
ttcttccgtggctgtcggacctcagagtctcaacgagtatatgtggcatcatccaggaca
tcatccagcagcaagagtcagggctctgtatccattgaggacagagcctctgacattacc
aacattgtcaaaaagtgtaatgagctggacctcaacataatcgtcatctggaaggcctat
gtggttgaggacaacaaacagctgatcctagagggccagctccatgtggcgctgcagacc
atcagcaaagaggccagttctctgactgccaaagaggaagctcaggaaatggtgctgctc
aagtttaaatcagaactgcctcctcctgtcgtcctgccctctgcagagctgtcgcaactc
atcaaaaccaacctgcactaccctgagacctacacacatccatttgtccaggatagtctg
tgtgtggtgccagttactctgactctgtctaactgctccttgacccaagtggatgtcatc
attgacttgcagcacaaaagcaccagcactctggaatctctggaggtccacagcttgttc
acctgggtgggtcagacccagtacaagctgcagctgaagcctcaggaggtgctgtgcctg
actctgcgagcctgtttcctccaggcaggagtctacaaccttaacactccacgggtcttt
gccaagccagccgagcagggcaccatgtgtgagacgagtcagcagacagctagtcctgct
ctcataatcatcaacaacgcctga
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