Siniperca chuatsi (mandarin fish): 122877473
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Entry
122877473 CDS
T08948
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122877473 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122877473 (fip1l1a)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122877473 (fip1l1a)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
MLANA
Motif
Other DBs
NCBI-GeneID:
122877473
NCBI-ProteinID:
XP_044054996
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Position
LG6:complement(23697938..23720408)
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AA seq
444 aa
AA seq
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MSSPESDSKVVEDEDEEKMYQLIYDMNAIDDKEEKEKGQIPSSSLQIDPPQESEQSLNSS
GHTPVHLKINAERRTHAVVGNTKGLDMDALDNIPGIPVVKANAAEKPWRKAGADISDYFN
YGFDEESWITYCKKQSKRRAANRKLYTKIMVQKEHARHEEKESCSAYPSLGNSSILASRQ
SSVTIDVTGGQPGSSGGVEGRQCLSDEGNNTQVVTEMSPEKDRITSYHLPPPSINISSLF
AFTPPPPFLYRPGPPPLSSLATLDSGHFKGLDDPSTSSGVSSLIPRSIASSAGVIDTAKA
WECYIWQEKCVKDRDRSREHGHGKDSQRGRERDRESCSSSHNSGEERMRHRDTTERGHKR
HSFERFSGEKERHQERRHRDKSEGWQKSSCSSGRSSSSSRSRGDGGEDRDSQSRHKHKKA
KRNRKDKETNKMSSAHQERKLKSD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacctgagtcggactccaaagttgtagaagatgaagacgaggaaaaaatgtat
caattgatttatgacatgaacgccatagatgacaaggaggaaaaggagaagggtcaaata
ccatccagttcacttcagattgacccacctcaagaatccgaacaaagcttgaacagctct
gggcacacacctgtgcatctgaaaattaatgctgaaaggaggacacatgcagttgttggt
aatacaaagggactagacatggatgcattggacaatatcccgggaatcccagtagtgaag
gcgaatgcagcggaaaagccatggaggaaagctggtgctgacatctcagattactttaac
tatggttttgatgaagaaagctggatcacctactgtaagaaacagtcaaaacgccgtgca
gctaatagaaaactatacactaaaatcatggtccagaaggagcatgctagacatgaagaa
aaagagtcttgttctgcttatccttccttaggcaactcatctatactagcttccagacag
tcaagtgttaccattgatgtgactggaggacaacctggatccagcggcggagtggaaggg
cgccagtgtctcagtgatgaaggaaacaatactcaggtggttactgagatgtcccctgag
aaggatagaattacttcttatcatctgccccctccatccatcaacatcagttctctcttt
gcatttacccctccaccacctttcctttaccgaccaggaccccctcctctctcctccctt
gctactttggacagtggacactttaaaggcttagatgacccctcaacttcatcaggtgtg
tcatccttaatcccaaggagtatagcctccagcgctggagtgattgacactgccaaagcc
tgggaatgctacatatggcaggaaaagtgtgtcaaggacagagacagatccagagagcat
gggcatggtaaagacagtcaaagaggcagagaaagggacagggagagctgttcctcttca
cacaacagtggggaggagcgaatgaggcacagggacactacggagcgagggcacaaacgc
cacagttttgaaagattcagtggagaaaaagaacggcaccaagagaggaggcatagagac
aaaagcgaaggatggcaaaaatcatcatgcagcagtggcaggagcagcagcagcagcagg
agtaggggggacggtggtgaggacagagacagtcagagtagacacaaacacaaaaaggcc
aaaagaaataggaaggacaaggagaccaacaagatgtcctctgctcaccaagagaggaaa
ttaaaatctgactga
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