Siniperca chuatsi (mandarin fish): 122877479
Help
Entry
122877479 CDS
T08948
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122877479 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
schu03310
]
122877479 (rorca)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122877479 (rorca)
Nuclear receptors [BR:
schu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
122877479 (rorca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122877479
NCBI-ProteinID:
XP_044055004
LinkDB
All DBs
Position
LG6:complement(19452665..19467755)
Genome browser
AA seq
474 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECAGLGAREENSDMAD
HGRTYRRGSSAALSDLDDITTLPESLLFNLPLTPEDVGGDYCNLDMLGGSAGSSSSSQSS
PEQTNLDFVDVNHSIKHEYQLLHDSGLFSHAILNPLPEGCSLLEIECITQSVVKSHIETS
QYSTEELKRMAWTLYNPEETRSYQTKSAEVMWQQCAIHITNAIQYVVEFAKHISGFMDLC
QNDQIILLKAGCMDVLLIRMCLAYNPINNTLLFDGKFATAQLFKALGCDDLVNAVFDLAK
NLSRIQMSVEEMALFSAAVLLSPDRPWLTDVQKIQKLQEKVYMALQHCLQKEGASEEKLA
KMVSKLPIMKSICNLHIDKLEFFCLVHPETAYTFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggtgattccctgtaaaatctgtggggacaaatcatcagggatc
cactatggtgtcatcacctgtgaaggctgcaagggtttctttcgacgcagccagcagaac
aatgctatgtactcctgctcacgacagaggaactgtcttattgaccggaccaaccgtaac
cgctgtcagcactgcaggttgcagaagtgtctcgctctgggcatgagccgtgatgcggtt
aagtttggtcgaatgtccaaaaagcagcgagacagcctgtatgcagaggtccagaagcac
cagcagtctcaggagtgtgcgggccttggtgcccgcgaggagaatagtgacatggccgac
catggccgcacctacagaagaggctccagtgccgcgctcagcgatctggacgacattacc
acgctgcctgaaagcctgcttttcaacctgccgcttaccccagaggatgtaggtggagac
tactgtaacctggacatgctgggcggcagtgcaggcagcagctcatcctctcagagttca
ccagaacagaccaacttggactttgtagatgtcaaccacagcatcaagcatgagtaccag
ctgttgcacgactctggactcttctcacatgctatcctcaacccgctgcccgagggctgc
tccctgcttgaaatagagtgtataactcagagtgtggtgaagtcccatattgagacaagc
cagtacagcacagaggagctgaagagaatggcgtggaccttgtataacccagaagagaca
cgctcataccagaccaagtcagctgaggtgatgtggcaacaatgtgccattcacatcacc
aatgcaatccagtatgtggtagagtttgccaagcacatctctggcttcatggacctctgt
cagaacgatcagattatcctcctcaaagcaggctgtatggatgttcttctgatccgtatg
tgtctggcctataaccctatcaataatacattgctctttgatggaaaatttgccactgct
cagcttttcaaagctcttggctgtgacgaccttgtgaatgcagtgtttgacttagctaaa
aacctgagccgtatacagatgtctgtggaagagatggctctcttcagtgctgctgtgctg
ctctcaccagaccgaccctggctgacagatgttcagaagatacagaagttgcaggagaaa
gtctacatggctctgcagcactgcctacaaaaagagggagcatcagaagagaaactagct
aagatggtgtctaagcttcccataatgaagtccatttgcaaccttcacatcgacaaactg
gagtttttctgtctggttcatcccgagacagcgtatacctttcctcctctgtatagggag
gtttttggcagtgaaatcaccttcccagactccacagagggctaa
DBGET
integrated database retrieval system
