Siniperca chuatsi (mandarin fish): 122877516
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Entry
122877516 CDS
T08948
Name
(RefSeq) cadherin-2-like isoform X1
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122877516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122877516
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122877516
04090 CD molecules [BR:
schu04090
]
122877516
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
122877516
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Major cadherins
122877516
CD molecules [BR:
schu04090
]
Proteins
122877516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Stevor
DUF2304
CD34_antigen
DUF5385
Motif
Other DBs
NCBI-GeneID:
122877516
NCBI-ProteinID:
XP_044055091
LinkDB
All DBs
Position
LG6:complement(32439697..32561979)
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AA seq
918 aa
AA seq
DB search
MHLRGIWMLMAALQAAVLGGQYERSLSSKQGSLPCTRGFTQKEYIIEMDQELAEGQVVFN
VSFMDCGGGKVWFENGDSSDFSVSEDGVVYALRRLSLVGKRKAVVVVYGRDLQSKQVWKT
RVHLHVRPNGHNTAPEQVKPSDATLTQRVPEILFPWRSVVVRGDGTLRRVKRDWVIPPIN
VPENSRGQFPEDLVRIRSDRDKNRMLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDR
EHISNFHLRAHAVDLNGNQVENPIDIVINVIDQNDNRPEFTHTIFNGSVPEGSKPGSFVM
TVTAVDKDDPKTANGMLRYKILSQNPQSPSSNMFTINNKTGDIITVAAGLDREKVTQYTL
IIQATDMEGNPTYGLSNTATTVIRITDVNDNPPEFTTDTFFGEVHENRVNVIVANLTVTD
KDQPHTPAWSAVYRIIAGDPTGRFSIPTDPTTNEGLLTVVKPVDFELTRSFMLTVEAENE
VPLARGIHLPRQSTATVSVRILDINESPEFSPNPKSIKLEEGLPAGSLLTTFTAQDPDRF
MRQTVRYSKMYDPASWLEIDPVNGRISTIAILDRESPYVKNNLYNVTFMASDNGIPPASG
TGTLQMYLLDINDNAPHVFPPEVEMCEKPDPNAINITASDPDLTPNAGPFAFELANRPSD
VRRNWTLSRLNGEYAQLRLRIGSLASGIYEVPIMITDSGNLPMSNTSHLRIKVCQCDHHG
DCVDMERIIAAGLGTGAIIAILICIIILLVLVLLFVMWMKRRDKERQAKQLLIDPEDDVR
DNILKYDEEGGGEEDQDYDLSQLQQPDALEPECVKVGIRRLDERPLHHDHQYPLRSAAPH
PGDIGDFIHEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLHSSSSCGDQDYDYLG
DWGPRFRKLADLYGGGDD
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttcgggggatttggatgctgatggcggctctgcaggctgctgttctgggggga
cagtacgagcgctcgttgtcaagcaagcaggggtcgttgccatgcacgaggggctttact
cagaaggaatacatcatcgaaatggaccaagagctggcagagggacaggttgtcttcaac
gtgagcttcatggactgcggtggagggaaggtgtggttcgagaatggagattcttctgat
ttcagtgtgagtgaggatggagtggtctacgccctacggcgcctcagcctggtgggaaag
agaaaagctgtggtggtggtctacggccgagacctgcagtccaaacaggtctggaagacc
agagtacacctccacgtccgtccaaatggccacaacacagcacctgaacaggtaaagccc
agtgatgcaacactgactcagcgggtaccagagatcttgtttccatggcgcagcgtggtt
gtcaggggtgatggcactctgaggcgggtgaagagggactgggtcattccgcctatcaac
gtccccgagaactcacgaggacagttccctgaggacctagtcagaatccgctcagacagg
gataagaaccggatgttgcgttacagtgtgacgggccccggggccgaccagcctccgacc
ggcatcttcatcatcaacccaatctcgggccagctgtccgtcaccaagcctctggacaga
gagcacatctccaacttccatttgcgagcacatgctgtggacctgaatgggaatcaggtg
gagaaccccatcgacatcgtcattaacgtcatcgaccagaacgacaacagaccagagttc
acacacaccatcttcaacggctcagtaccagagggatccaagcctggatcctttgtgatg
acagtgacagcggtggacaaggatgatccaaaaactgccaatgggatgctgcgatataag
atcctctcccagaatccccagagcccctcctccaacatgttcaccattaacaacaagacc
ggtgacatcatcactgtggcagcgggcctcgatcgggagaaagtcacccagtacaccctg
atcatccaggctacggacatggagggaaaccccacctacggcctgtccaacactgccacc
actgtcatcaggatcactgatgtcaacgacaatcccccagaattcaccacagacacattc
ttcggggaggttcatgagaacagggtgaatgtgatcgttgctaacctgactgtgacggat
aaagaccagcctcacactccagcctggagcgctgtgtaccgcatcatcgccggagacccc
accggacgcttctccatccccactgaccccaccaccaacgagggcctgctcactgtggtc
aagccagtagattttgagctgacccgttccttcatgctgacggtggaggcagagaatgaa
gtcccactggcccgcggcatccacctgcctcgtcaatccacagcaaccgtctctgtacga
atcctggacatcaacgagagtccagagttcagccccaaccccaagtccatcaaactggag
gagggtctgcctgccgggtctcttctcaccaccttcactgcccaggaccccgaccgcttc
atgagacaaactgtccggtactccaagatgtacgatcctgccagctggctggagattgac
ccggttaacggtcggatttccaccatcgccatccttgaccgagagtctccctacgtcaag
aacaacctctacaacgttaccttcatggcttctgataacggtatcccgcctgccagtggg
acaggcacccttcagatgtacctgctggacataaatgacaatgcacctcacgtgttccct
cctgaggtggaaatgtgtgagaagccagatcccaacgccatcaacatcacagccagtgac
cccgacctgacccctaacgctggacccttcgccttcgagttggccaatcgtccatcagat
gtacgccgcaactggaccctcagtcgcctcaatggcgagtacgcccagcttcgactgcgg
atcggctctctagccagtgggatctacgaggttcccatcatgatcacagactctggcaac
ctgcccatgtccaacacatcccacctgaggatcaaggtctgccagtgtgatcaccatgga
gactgtgtggacatggagcgaatcattgcggcaggactgggcactggagccatcatcgcc
atcctcatctgtatcatcatactattagtgctggtgctgctgtttgtgatgtggatgaag
aggagggataaggagcgccaggccaagcagctcctcattgacccagaggacgacgtccga
gacaacatccttaagtatgacgaggagggaggaggagaggaggaccaggactacgatctg
agtcagctgcagcagcctgatgccctggagccagagtgtgtcaaggtggggatcagacgc
ctggatgagaggcccctccatcatgaccaccagtaccccctccgctctgctgccccccac
ccaggagacataggagacttcatccacgagggcctgaaggcagcagacaacgaccccacc
gcccccccctacgactccctgctggtgtttgactacgagggcagtggctccaccgctggc
tccctcagctccctgcactcctcctcaagctgcggagaccaggactacgactacctcggc
gactgggggccacgcttccgcaagctggccgacctgtacggcggaggggatgattag
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