Siniperca chuatsi (mandarin fish): 122877601
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Entry
122877601 CDS
T08948
Symbol
cnga3a
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha isoform X1
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122877601 (cnga3a)
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122877601 (cnga3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
RR_TM4-6
Androglobin_V
Zip
NPR3
Presenilin
Ion_trans_2
Tim54
EMC3_TMCO1
Motif
Other DBs
NCBI-GeneID:
122877601
NCBI-ProteinID:
XP_044055296
LinkDB
All DBs
Position
LG6:complement(25189035..25196830)
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AA seq
742 aa
AA seq
DB search
MAKIGSEKSFLSRHRLSTNTPDEELAVIENGDSRTHSLCEDNSERALSSESHRNSFTGAG
AMARLSYFFFMLWNWASHRVNPEAERHDSFLERFRGPELKDFSSRESNAQSVGHNDTIRK
RNLASKWPLAAYNMNNCNNTDDKKEDKKEEIKKDEKKEEKKDETKDGDKKEEEKKDEKKD
DKKDEKKDEKKDDKKDDKKDDKKKEEPPKEIWIMDPATDQYYKWLTVIAGPVFYNLMMIV
TRACFNELQDTYTNLWIVLDYSSDFIYYADTFVRSRTGYLEQGLLVKDSKKLRNKYRTTS
QFKYDMISMIPTDLLFLKFGFNNPEFRFNRLCKISRLFEFFERTETRTSFPNMFRISNLV
LYILIIIHWNACMFFAISKTIGFGSDTWVYPNISHPEHGRLARKYIYSLYWSTLTLTTIG
ETPPPVRDVEYLFVIADFLTGVLIFASIVGNVGAMISNMNASRAEFQAKIDSIKQYMQFR
KVTKDLEARVIKWFDYLWTEKKTCDEKEVLKNLPDKLKAEIAINVHLDTLKKVRIFQDCE
AGLLIELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGAYF
GEISILGIKGSKAGNRRTANIRSVGYSDLFALSKDDLVEALTEYPDAKKALEEKGKAILM
KDNLIDEAVANAGADPKDIEEKIIKLQSNLDIMQTKFAKLMAELMSSQTRMKQRVTQMEA
KVKSIQPEDLSEVVADKDKKVQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcggcagcgaaaagtcctttttaagcagacatcggttgtccaccaacacg
cccgatgaggagctcgctgtcattgaaaatggggacagcaggactcactctctttgtgaa
gacaactctgagagagcgctgtcttcagagtcccacagaaactcatttacaggtgctggg
gcaatggccaggctctcttacttcttcttcatgctgtggaactgggcgtctcacagagta
aaccctgaagccgagaggcatgactctttcctcgagcgcttcagaggccctgagctcaaa
gacttctccagtcgagagagcaatgcccagtctgtgggccacaacgacacaatccgtaag
agaaatcttgccagtaagtggccgctagctgcttacaacatgaataactgcaacaacaca
gatgacaaaaaagaggacaaaaaagaggagattaaaaaagatgagaaaaaggaggagaaa
aaagacgagacgaaagacggggacaaaaaggaagaggagaagaaggacgagaagaaagat
gacaaaaaggatgagaagaaagacgagaagaaagatgataagaaggatgataagaaagat
gataaaaagaaagaggagccaccgaaagaaatctggattatggatccagccacagaccag
tactacaaatggctgaccgtcatcgcaggcccagtattttataacctgatgatgattgta
acaagagcctgttttaacgaactccaggacacatatacaaacctctggatagtcttggac
tacagctcagacttcatctactatgcggacacatttgtcagatcaagaacaggttacctg
gaacaaggcctgctggtaaaagattccaagaaactaagaaataaatacagaacaacatct
cagttcaaatacgatatgatctcaatgatacccactgatctgctatttctgaaatttgga
ttcaacaacccagagttcagattcaaccgtctttgcaaaatctcaaggctttttgagttc
tttgagcggactgaaaccagaaccagcttcccgaacatgtttcgcatcagcaatctcgta
ctttatatcctcattattatccactggaatgcttgtatgttctttgccatttcgaaaacc
attggttttggatctgacacgtgggtatatcccaatatcagccacccagagcacggtcgc
ttggccagaaagtacatctactccctgtattggtccacactgaccctcaccaccatcgga
gagaccccaccaccagtcagggatgttgaatacctctttgtcattgccgatttcctcact
ggtgtgctgatctttgctagtattgtcggtaacgttggtgccatgatctccaacatgaac
gcctctcgtgctgagttccaggcaaagatcgactccataaagcagtacatgcagttccga
aaggtcaccaaagacctggaagccagggtcatcaagtggtttgactacctgtggactgag
aagaagacctgtgatgagaaggaagttttgaagaacctcccagacaagctcaaggctgag
attgccatcaacgtccatttggatacgctgaaaaaagtgcgtattttccaggattgcgaa
gccggtctgctgattgaattggtgctcaagctgcagccacaagtgttcagtcctggagat
tacatctgtaagaagggggatattggcagggagatgtacattatcaaggaagggaagcta
gctgtggtggccgatgatggagtcactcagtttgtagtgctcagtgatggcgcatacttt
ggggaaatcagtatcttgggtattaagggcagtaaagcaggcaacaggagaacagccaac
atcagaagcgtaggctactctgatctctttgccctgtccaaagatgacttggtggaagct
ctcactgagtatccagacgccaaaaaagctctggaggagaaggggaaagccatcctgatg
aaagacaacctgattgatgaggcggtcgccaacgccggcgccgaccccaaagacatagaa
gagaagatcatcaaactgcagagcaacctggacatcatgcagaccaagttcgccaagctg
atggcggagttaatgtctagccagacgaggatgaagcagagggtcactcagatggaggcc
aaagtgaaatccatacaaccagaggacctgtcagaagtggtggccgacaaagacaaaaaa
gtgcagtaa
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