Siniperca chuatsi (mandarin fish): 122877693
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Entry
122877693 CDS
T08948
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122877693
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122877693
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Major cadherins
122877693
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
122877693
NCBI-ProteinID:
XP_044055522
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Position
LG6:32822527..32844239
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AA seq
1159 aa
AA seq
DB search
MIRVSPPAFVLLLFALQAAAVLSANSGDNLVRKRREWILPPKPLKENADYTQKESIARIR
SDFETEANIDYSLEGIGANQYPFHVFVVDPKTGLIRVTKVLDRELIDTYNLSGVARYSDG
RHAEKKIDIRIKVVDENDNAPVFGVIKPGEVDELSPAGTSVMKITATDADEPGHENSQIA
YTLVDQNPPHDMFSISSDGIISVKNSALDRERADCYILTVRGQDLNGKPGGNSGTGTVTI
HVRDVNDNLPTLEKEEYESSIEENTQGVEVMRIKSEDRDLKNTDNWEAVFDIVKGNEAGY
FSIRTDPNTNEGILMLDKAVDYEDVKDLELGLAVRNKAPLYDGSRVNAVAGISFGGGASG
ASGASGASGAGGGSGGSSWQSGTTFKTYPIKINVKNQPEGPHFDPKVKAIPISEGGHSIN
INDVIAHYTAIDGDTRKPAENVRYAKGSDPDNWLTIDPKTAEIKLNKMPDRESPFLVNGT
YFAKVLCITEDMPAKTATGTVAIQVEDFNDHCPTLTSNIQTMCTTDDSIIVSAKDEDVFP
NGPPFDFVIVPEGTEGKWKVEHLNDTAAILRAQESMWLGFYEVEFVVRDGQGEACPEPQK
VKVQVCTCEDGVVCGKRGAHGQPSKGAELGPAGIGLLFLGLLLLLLIPLLLLFCQCGGAA
GLPGGFTEMPFDTKSHLINYHTEGQGENTEVPLLNMPTQLDGDMINMGMGMANKTSAMGP
MAGLDFQKSVTSMDGMNGAVYQEGFASGHRDRTWGMMNQPSGSGFYSEFEGRESGVGGGM
YDGMALPDHFLGQYYTQKVTSGNENLGVKDGLLVYDYEGQGSPAGSVGCCSLLESDNDLH
FLDDLGPKFKTLAEVCGGKKTPTEVKQLFTPLPSASINTQSSVSSLVTAQQLPPPPKLQP
AIPKTGQTVVRETSEHSQMVKDSTATVREGMTTVKEGVANHGQMLLLQQQQPVYYTTTPV
LQPMHYVVQPQIQNTVLLTEASTNMQGMVLVSGTQTGPAQGVVVQGQTVMSSRQAQVPGM
VLVDKSRVQGGGANLIHTGNLSGSQTMMVVEGNVPAGSMKVLKGSQTCHVQGGTLQAGGL
SGSQRVLVVGAPTSSRGQLVQEAGGLSQKSDVSGSQRVLYSKGSTSAGSQSSVVGSSTTT
VSTTPTYRKVVVQETREIN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgattcgggtttctccgcccgcgtttgtgttgctactgtttgcgctccaggctgctgct
gtgctgagtgccaactctggagacaatctggtaagaaaaagaagagaatggattctccct
ccaaagccactgaaggaaaatgcagactatactcaaaaagaatccattgccaggattcga
tcagattttgaaactgaggcaaatattgactactctctagaaggcattggtgcaaaccaa
tatcccttccatgtgtttgtagttgaccctaaaactggactaattcgtgtgaccaaagtc
cttgacagggagctcatcgatacgtacaatctgtcaggtgtcgctaggtacagcgatggc
cgccatgcagagaaaaaaattgacatacgaatcaaggttgtagatgagaacgacaacgct
ccagtgtttggagtcatcaagccgggggaggtggatgagctcagtcctgcagggacttca
gttatgaaaataactgcaactgatgctgatgaaccagggcatgagaactctcagatcgct
tataccctcgtagatcagaatccacctcatgacatgttctccatttccagtgatgggatc
atctccgtcaaaaattctgccctggacagagagagagcagattgctacattctgacggtg
agaggtcaagacctaaatggcaaaccagggggaaacagtggaaccggcactgttaccatt
catgttcgagatgtgaatgacaacctccctactctggaaaaagaggagtacgagagcagc
attgaggagaacacacaaggtgtggaagtgatgagaattaaatcagaggaccgggacctg
aagaacacagacaactgggaagctgtgtttgacattgtcaaaggcaacgaggcagggtac
ttcagcatcagaacagaccccaacaccaacgagggcatcctaatgcttgacaaggctgtg
gattatgaggatgtgaaggaccttgaactaggactagctgtgagaaacaaggctccactg
tatgatggatctagggtaaatgctgtagctggtataagttttggagggggagcaagtggt
gcaagtggtgcaagtggtgcaagtggtgcaggaggtgggtctggaggatcatcatggcaa
agtgggaccacatttaaaacctatccaatcaaaatcaatgtaaagaaccagcctgagggg
ccacattttgaccccaaagtcaaagctattcccatctcagagggcggccactccatcaac
attaatgatgttattgcccactacactgcaatagatggagacactaggaaaccagctgag
aatgtcaggtatgccaagggctcagaccctgacaactggctaaccatcgacccaaagaca
gctgagatcaaactgaacaagatgcctgacagagaatctccattcctggtcaatgggaca
tattttgctaaagtactttgcattacagaagacatgcctgctaaaacagccaccggcacc
gtagccatccaggtggaagattttaacgaccactgccccaccctgaccagtaacattcag
actatgtgtaccacggatgattctattattgtgagcgctaaagatgaggatgtattcccg
aacggacctccttttgactttgtcatcgtcccagagggcactgagggcaaatggaaggtg
gagcatctcaatgacactgcagctatcctgagagcccaggagtccatgtggcttggtttc
tatgaggtggaatttgtggtgagggatgggcagggagaggcctgtccagaaccacagaag
gtgaaagtccaagtttgtacttgtgaggatggagtggtgtgtgggaaacgaggagcccat
ggtcagcccagcaaaggagcagagttaggacctgcaggcatcggactcctattcctgggc
ctgctgctcttattactcattcctctgttgctgctcttttgccaatgtgggggggctgcc
ggcctgccagggggctttactgagatgccttttgacaccaaatcacacctcattaactac
cacactgagggccagggagagaatacggaagtgccgctactgaacatgccaacacaactg
gatggagatatgatcaacatgggtatgggcatggctaacaaaacttcagcaatgggaccc
atggcaggcttggatttccagaaatccgtcacttccatggatgggatgaacggggccgtc
tatcaagaaggttttgcaagtggccacagagataggacatgggggatgatgaaccagccg
agtggcagtggcttctactctgagtttgagggcagagaatcaggagtaggtggaggaatg
tatgatggcatggctctaccagaccacttcctgggacagtactacactcagaaggtgacc
agtggaaatgagaaccttggtgtgaaggacggtcttttggtttatgactacgagggccag
ggttcccctgctggctcagtgggctgctgcagcctcctcgagtctgacaacgacctgcac
ttcctcgatgacctcgggccaaagttcaagaccctggctgaggtgtgcggaggcaagaag
accccaactgaagtcaaacaactgttcactcctctgccaagtgcctccatcaacactcag
agctcagtatcgagtttggtgactgcccaacagctgcctcctccacccaagctgcagccg
gccatccccaaaacagggcagactgtggtcagggagacatctgagcattctcagatggtg
aaggacagcacagccacggtaagggaagggatgaccacagtgaaggaaggggtggcaaat
catggccagatgctcctgctacagcagcagcagcctgtttactacaccaccacccctgtg
ctgcagccgatgcactatgtagttcaaccacagattcagaacactgtgttgctgactgag
gcatcaaccaacatgcagggcatggtactggttagcggcacccagactggacctgcccaa
ggtgtggtcgttcaggggcaaacagtgatgtccagcagacaagcccaggttcccggcatg
gtgctggtggacaagagcagggtccaggggggtggtgccaacctgatccacaccggcaac
ctctctggctcccagaccatgatggtcgtggagggcaatgtccctgcagggtcaatgaaa
gtgctgaaggggagccagacctgccacgtgcaggggggcactctacaggcaggagggctt
tcaggatctcagagagtcctggtggttggagcaccaacaagcagcagagggcagctggtc
caggaggcaggaggtctgtcccagaagagtgacgtctctggctctcaaagagtcctctac
agcaagggcagcacatccgctggctctcaaagcagcgtggtgggttcctctaccaccaca
gtgagcaccactcccacctaccgcaaggtggtggtgcaggagacaagagaaattaattga
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