Siniperca chuatsi (mandarin fish): 122877718
Help
Entry
122877718 CDS
T08948
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03030
DNA replication
schu03410
Base excision repair
schu03420
Nucleotide excision repair
schu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122877718 (rfc4)
03410 Base excision repair
122877718 (rfc4)
03420 Nucleotide excision repair
122877718 (rfc4)
03430 Mismatch repair
122877718 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schu03032
]
122877718 (rfc4)
03036 Chromosome and associated proteins [BR:
schu03036
]
122877718 (rfc4)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122877718 (rfc4)
DNA replication proteins [BR:
schu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122877718 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
122877718 (rfc4)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122877718 (rfc4)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122877718 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
122877718 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_30
AAA_11
AAA_28
Gp44_lid
DUF815
Mg_chelatase
AAA_19
AAA_24
AAA_14
KH_DUF2096_C
SLFN-g3_helicase
RuvB_N
AAA_5
DNAX_ATPase_lid
Cdc6_lid
ResIII
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
122877718
NCBI-ProteinID:
XP_044055585
LinkDB
All DBs
Position
LG6:29573007..29605079
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGVTVQTTRPQKDKAAAGPSTEKKAKAIPWVEKYRPKCVDEVAFQDEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKN
FAQLIVAGTRQDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLEICEKENLKYTKESIAALVRVSEGDLRKAITFL
QSAARLNINKEITERAVIEIAGVIPPKMIDNLLQICFKGTFEKLEVAVRSMVDEGYAATQ
ILSQLHESIIEQDLSDKQKSAITEKMAVVGKCLSDGADEYLQMLSLCSVIMQQASQNN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttttgaaaggagtaactgttcagactaccagacctcagaaagacaaggca
gcagcagggcccagtacagagaagaaagccaaggctattccttgggtagaaaaatacagg
ccgaagtgtgttgatgaggtggcctttcaggatgaggtggtagcagtgctgaagaaatct
ctggaaggagcagatcttcccaacttgcttttctatggccctcctggaacaggaaagacc
tccaccatcttagctgctgccagagaactttatggtccagagctgtacagacagagggtg
ctggagctcaacgcctctgatgaacgaggcatccaggtcgtcagagagaaggtcaagaac
tttgctcagctcatcgtagctgggactcgccaagatgggaagccgtgtcctccttttaag
atcatcatcctggatgaggcagattccatgacggcaccagctcaggctgctctcaggcgg
accatggagaaggaatcccgcaccacccgcttctgcctcatctgtaactacatcagcagg
attattgagcctctgacctctagatgttccaagtttcgcttcaaacctctagcaaatcag
atccaagaagagcgcctgctggagatctgtgagaaggagaatctcaagtacaccaaagag
agtatagcagcattggtgagggtgtctgagggagacctgcggaaagccatcaccttcctc
cagagtgcagcgcgcctcaacatcaacaaggagatcacagaacgcgctgtcattgaaata
gccggggtcatccctcccaagatgattgacaacttgctccagatctgcttcaaaggaaca
tttgagaaactagaggttgcagtcaggagcatggtggatgaaggctatgcagccacacag
attctgagtcagctccatgagtctatcatagagcaggacctgagtgacaagcagaagtca
gccatcacagagaagatggcagttgtgggcaagtgcctgtcagatggtgcagatgagtac
ctgcaaatgttgagtctgtgctcagtcatcatgcagcaggcctcccagaacaactaa
DBGET
integrated database retrieval system