Siniperca chuatsi (mandarin fish): 122877736
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Entry
122877736 CDS
T08948
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b
KO
K06527
vascular cell adhesion molecule 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122877736 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122877736 (vcam1b)
04090 CD molecules [BR:
schu04090
]
122877736 (vcam1b)
04091 Lectins [BR:
schu04091
]
122877736 (vcam1b)
Cell adhesion molecules [BR:
schu04515
]
Immunoglobulin superfamily
VCAM
122877736 (vcam1b)
CD molecules [BR:
schu04090
]
Proteins
122877736 (vcam1b)
Lectins [BR:
schu04091
]
I-type lectins (Siglecs)
122877736 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_C17orf99
ICAM1_3_5_D2
ICAM_N
REJ
DUF7282
Motif
Other DBs
NCBI-GeneID:
122877736
NCBI-ProteinID:
XP_044055615
LinkDB
All DBs
Position
LG6:420052..435846
Genome browser
AA seq
819 aa
AA seq
DB search
MSLLSVCRIFVQLLSAVLLMSSWCVQGLRVDVFPRRPLCRLGERQQLVCRVHDCPDMPSV
SWTRLGDQPLTASVSTNRTASVVTFDPVMMEHEGALLCKVICGGELKQIRTSVRVYSFPS
GPVIRGQDHLRLGAESALTCQVSELYPAELLTLTWLRGDTVLQSIVGDPGSSSVWSEYRF
TPLNQDLGGNISCRATLDLQDLPAEDKIRETTVPLNLLYAPVVTAISDSVLVMAGSPLTL
TCSAEGNPEPVVTWSFRTAGGRSVPRGRGRQLVFAAVSLSEAGWYECDARNAEGNQTAAV
EITVHAPPTNTSLSVSPGEQVVEGQQVTFTCHSDGAPPTTLVLRREGAELNRTDPASSPL
SFSLSSVLLEDSAHYQCEASNQYGSQLVTSSITVGVHPLRVEVSPPVSAAERGSGLVLTC
RATGCLHPPTFTWRRTDQDRTVLQRTQQQDGLSLLHLQDLDLQDQGGYSCEAECDSVIRT
GNTQVHVLSFPSDPVLEDPGPVLLGQEAVLRCDVRNVFSTNQMRIQWLSGNTTLMSESFR
FSGSLQNVSSVLQHRVEEDQRDLTCRAELLTEDGDVWRSRRTGVPLQVHYPPRRTSLSVS
PGEQVVEGQQVTFTCHSDGAPPTTLVLRREGAELKKTDPASSSLSFSLSSALLEDSALYQ
CEASNQYGSQLVTSSITVGAPPRNTTVLVLPSAEVQEGQNVTICCQTISFPPSAVALKKL
TNGTELYSPNGTFLLVNVSAGDSGLYQVNVTNDLGFQVKVFSISVRERRPSLPPSLSVVI
IPVVCVAAGLAAAALLLDYLRRSRKKGFYQLPQSAPPSA
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctgtctgtctgcaggatctttgttcagctgctctcagctgtgctgctgatg
tcatcgtggtgcgttcagggtctgcgtgtggatgtgtttcccagaaggcctctgtgtagg
ctcggggagcgccagcagctggtgtgtcgggttcatgactgtcccgatatgcccagcgtc
tcctggacccggttgggggaccaacctctgaccgcctccgtcagcaccaacaggactgcg
tctgtggtgacctttgaccccgtgatgatggagcacgaaggagctctgctgtgtaaagtc
atctgcggaggagaactcaagcagatcagaacctcggtgcgggtttactccttcccgtca
ggtcctgtgatcagaggtcaggaccacctgaggctgggggcggagtcagccctgacctgc
caggtatctgaactttaccctgccgagctgctgaccctcacctggctcagaggagacacc
gtcctgcagagcattgtgggagatcctggatccagctcggtctggtctgaatacagattc
acccctctgaaccaggacttaggaggcaacatcagctgcagggccacgttggacctgcag
gacctgcctgctgaggacaagatcagagagaccaccgtccccctaaacctgctctatgct
cctgttgtcacggcgatatcagactctgtgttggtgatggccggctctccgctcacgctc
acctgttctgcggagggaaaccccgagccagtcgtcacctggagcttcaggacggcaggc
ggtcggtctgtgccgcggggtcgaggccgtcagctggtctttgcggcggtgagtctgtct
gaagccggatggtacgagtgtgacgcccgaaacgccgaaggaaaccaaaccgctgccgtg
gagatcaccgttcatgctccgcccaccaacacctccctctcggtgagtccaggtgagcag
gtggtggagggtcagcaggtgacgtttacctgccactcagacggagctccgcccaccacg
ctggtgctgaggagggagggggcggagcttaataggactgaccccgcctcctctccgctc
tccttcagcctctcctccgtcctgctggaagactccgcccactaccagtgtgaagcctcc
aaccagtacggatcccaactggtcaccagctccatcactgtcggagttcaccctctgcgg
gtggaggtgagtcctccggtctcagcagcagagcggggttcaggtctggtcctgacctgc
agagccaccggatgtctccaccctcccaccttcacctggaggaggacagaccaggaccgg
accgtcctccagaggacgcagcagcaggacggactgtccctgctccacctgcaggacctg
gacctccaggatcagggaggatacagctgcgaggccgagtgtgactccgtcatcaggacc
ggaaacacccaggtccacgtcctctcgtttccgtctgatccggttctggaggatcctggt
cctgtcctgcttggccaggaggcggtccttcgctgtgatgtcagaaacgtcttctcaacc
aatcagatgaggatccagtggctgtcggggaacacgacgctgatgtcggagtcgttcagg
ttctccggttccttacagaacgtctcgtctgttcttcagcaccgggtcgaggaggatcag
cgggatctgacctgcagagccgagctgctgacggaagacggagacgtgtggaggtccagg
aggaccggcgtccccctgcaggtccactatcctccgaggagaacctccctctcggtgagt
ccaggtgagcaggtggtggagggtcagcaggtgacgtttacctgccactcagacggagct
ccgcccaccacgctggtgctgaggagggagggggcggagcttaagaagactgaccccgcc
tcctcttcgctctccttcagcctctcctccgccctgctggaagactccgccctctaccag
tgtgaagcctccaaccagtacggatcccaactggtcactagctccatcactgtcggagct
cctccgaggaacaccacagtcctcgtcctgccgtctgcggaggtccaggagggacaaaat
gtcaccatctgctgccagaccatcagctttccgccgtcagccgtggccctgaagaagctg
acgaatgggacggagctgtattcccccaatggcaccttcctattggtcaacgtctcagcc
ggagactctgggctttaccaagtcaatgtgaccaacgacctcggtttccaggtcaaagtc
ttcagcatcagcgtcagagagagaagacccagccttcctcccagtctcagcgttgtcatc
atcccagtcgtctgtgttgccgctgggctagcagctgctgctctgctcctcgactacctg
agaagatccaggaagaaaggcttctatcagctgccccagtctgctccgccttcagcctga
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