Siniperca chuatsi (mandarin fish): 122877797
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Entry
122877797 CDS
T08948
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122877797 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122877797 (taf4b)
03036 Chromosome and associated proteins [BR:
schu03036
]
122877797 (taf4b)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122877797 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
122877797 (taf4b)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122877797 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
122877797
NCBI-ProteinID:
XP_044055800
LinkDB
All DBs
Position
LG6:32133220..32231789
Genome browser
AA seq
717 aa
AA seq
DB search
MATNNVVNEAQKLESCEAAADGDPSIQVKILQVPAKCGPVAAVQPPHTAAGVSRGDSMFA
PPKIIPTGQGHQSTSSTVTVPGLQTSSPSVMVVAKVPPSGGVSVNSQPQVTKPALSQLAS
MNQATTSGRTVVITVPRAAAPQPVTVAPRLPQTASPQLPANIQIPPGMMLIRSDSGQLML
VSQQALAHAQQGPRGVSGQVPRILAPQVSAAAGNKGHEKVTVIRMAAPPSFQPAPAPVQK
TAVVKMIGVAPKPAVVQTLSAVSERGSQPRIQAVNTETKKEPATTFTQETLESVKKCKNF
LVTLIKLASSDSRSVDMANNVRGLVRSLLEGKLEAEEFTEQLYHELKSTPQPCLVPFLKK
SLPAVRRLTADPQLFIQQASTSTHNPNTLSSTMKQSSTDTGQKFSTSQQVIQLPRGVTLR
PGLTTLAHSRNYISKSSRPTPKHTVVQSGKHFTGTFSMKQPFMQDPPCSTKFAFKNSSGS
YKEDDDINDVASMAGVNLREENAQILTTMVGSVVQSCQDHPFLSPNPVLSRILHTGQALG
VTDVAPEVVALVSHATQECLRGLLEKLAVMAEHRKAALKEDLWHAKVSDVRSQLRFLEEV
ESLKKKRKDEEERERLLRLARSRSHTEDPQHQQLKQRAKELQQIEEAQLQQREANLTALA
AIGPRKKRPLEQIESQVTLLPRPGLQRVTRVMLRDLLVCMEQDHFLRHSLSLYKAMI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaataacgtggttaatgaagcccagaagctggagtcctgcgaggcagcagca
gatggagacccctctattcaagtcaagattttacaggtcccagccaaatgtggacccgtg
gctgctgtgcaacccccccacactgctgcaggtgtctcaaggggcgactctatgtttgcc
ccacctaaaatcatccccactggccagggccaccaatccacctcctctacagtcacggtc
ccagggcttcagacgtcctctccttctgtcatggtggtagcaaaggtgcccccctcagga
ggagtgagtgttaacagccaaccacaggtaacaaaaccagctttgagtcagctggcctcc
atgaaccaggccacaacctcaggaaggacggtggtgataactgtaccaagggcagcagct
ccccagccggtcactgtggcccctcggctgccacagactgcttccccgcagctcccagcc
aatatccagataccaccaggtatgatgttgatccgcagtgatagtggtcagctgatgctg
gtatcccagcaggctttggcacacgctcagcagggaccaagaggtgtcagtggccaagtg
cccagaatactggccccgcaggtatctgcagcagctggaaataaaggtcatgagaaggtg
acagtgatcaggatggcagcccctcccagtttccaaccagcaccagcaccagtccagaag
acagctgtggtaaagatgattggcgtagctcccaaaccagctgtagtccaaaccctcagt
gctgtgtctgagcgggggagccagcctcgcattcaggcggtcaacacagaaaccaaaaag
gagccagcgaccacgtttactcaggagaccctggaaagtgtgaagaagtgcaagaacttc
ctggtgaccctgatcaagctggcctccagtgactccaggtctgtcgacatggctaacaac
gtcagaggactggtcaggagtctgctggaagggaagctagaagcagaggagtttacagaa
cagctctatcatgagttgaagtcgactccacagccctgcttggtgcctttcctcaagaaa
agtcttcctgcggtgcgtcgccttactgcagacccccagttatttatccaacaggcttca
acttccacccacaaccccaacactctgtcttccaccatgaagcagtccagcactgacact
ggacaaaaattcagtacaagccagcaggtgatccagctgccccgaggagtgaccttgaga
cctgggttgacgacattagcccactccagaaattacatatctaagagcagcagacccacc
cccaaacacacagtggtccagtcaggaaaacacttcacaggaactttttcaatgaaacag
cctttcatgcaggatccaccttgttctaccaaatttgcattcaagaacagttcaggatct
tacaaagaagatgatgacatcaatgacgtagcctccatggctggagtcaacctgagagag
gaaaatgcacaaatcttgaccactatggttggttctgtggtccagtcgtgccaggatcat
cccttcctctcacctaacccagtgctcagccgaatccttcatacaggacaggcactggga
gtaactgatgtcgctccagaggtggtagctctggtttctcatgctacacaggagtgtctc
cgtgggctgctggagaagcttgctgtgatggcagaacaccgcaaggcagccctgaaggag
gacttgtggcatgccaaagtgagtgatgtacgctcccagcttcgcttcctggaggaagtg
gagagtttgaagaagaaaaggaaagatgaagaggagagagagagactgctgcgtttggcc
agaagtcgctcacacactgaggatccacagcatcagcagctcaagcaaagagccaaagag
ttacaacaaatagaagaagctcagctgcagcaaagagaggccaacctcaccgctctagct
gccattgggcctcgcaagaagagacctctggagcagattgaaagccaggtgactctgctg
cctagaccaggtcttcagagagtgactcgggtcatgctgagggatctgctggtgtgtatg
gagcaggaccacttcctacgccattctctctctctgtacaaagcgatgatctga
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