Siniperca chuatsi (mandarin fish): 122877829
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Entry
122877829 CDS
T08948
Symbol
hdgfl2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schu03400
]
122877829 (hdgfl2)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122877829 (hdgfl2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Motif
Other DBs
NCBI-GeneID:
122877829
NCBI-ProteinID:
XP_044055892
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All DBs
Position
LG6:17984272..17991645
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AA seq
667 aa
AA seq
DB search
MPHNFQPGDLVFAKMKGYPHWPARIEDVADGAVKPPPNKIPIFFFGTHETAFLAPKDLFA
YDKYSERYGKPNKRKGFNEGLWEIQNNPHASYSAPPVFRLGRLGDQRFKPASSSDSEGNN
AGGGSDEDDEEEEATVPQKADSGSEVDSDSGSEDQGRGGGVKRKPPPAKRPPPPKKARGS
SSDRDGEESGSPSESEPTPSESDSGKNSDQDFTPEKKSGGRGGKKAGGRGKKKKASSNSD
SDSGSGSEKKVVDSDSEDEKPRPALSGSESQSGSKSESDSDPPPRKGPQARKKEKPAPKP
RARKPKPAPAKRAPSSSSDSDSDSEPDCISEWKKRDEERRRELEERRKKEEAEELRRLRE
REKEEEEKKKKDKDKGKKGSDSDSSSSSDEGVDDHPLKKSKKPPPPPIPAPSDSDSPPLA
EVKKPSKKPDNQKKARIKKEKERKERKEKELKEKKVRRSEEKPRARSKPEKPKRKLEPEK
KVEKKKEPSPEEKLQKLHTDIKFALKVDNPDIERCLQALEELEAVPVTSQILHKNAEVIA
TLKKIRRYKASTAVMEKASDVYNKLKLRFVGKGEVAAKPKMENKEPDDNEKETQDTDSTP
VNGDSEQKTDDMEEKPKSPAHEENNDDTASSPNRRSPESPAEQQTHTYEEAEDNSISAEM
EPPAVES
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgccacacaacttccagcccggagacctggtcttcgctaaaatgaaggggtacccccac
tggccagccaggattgaagatgtggctgatggggcagtgaagccacctcctaataaaatc
ccaattttcttctttgggacacatgaaacagcattccttgcaccaaaggacctttttgcc
tatgacaagtacagcgaacgctatggaaagcccaacaaaaggaagggattcaatgaaggt
ttatgggagatccagaacaatccacatgcctcctacagcgcaccgcctgtattcagacta
gggcgtcttggtgaccagcggtttaagccagccagctcatctgacagcgagggcaacaat
gccggaggaggaagtgatgaggatgatgaagaggaagaagccacagtgcctcagaaagca
gattcaggaagtgaagttgactcagattctgggagtgaagaccaagggaggggaggagga
gtgaagcgaaagccaccacctgctaagcggcctccccctccaaaaaaggcccgaggctcg
tccagtgaccgagatggagaggagagtggctccccctctgaatcagaacccacaccttca
gagtctgactctggcaaaaacagtgaccaggattttactccagagaagaaatctggtgga
cgaggtggaaagaaagcaggaggcagagggaagaaaaagaaggcttcatctaactctgac
tcagactcgggatcagggtcagagaagaaagtagtggacagcgactcagaggacgagaag
cctcgaccagctctgtctgggtctgaatcccagtccggctcaaagtctgagtcagactca
gatccacctccccggaagggcccacaggcacgcaagaaagagaaacctgcaccaaagcct
cgggcacggaaacccaaacccgccccggcaaaacgagcaccttcatcatcctccgacagc
gacagtgacagtgaacccgactgcattagtgaatggaagaaacgagatgaggaacgcaga
cgagagctggaggagcgccggaaaaaggaggaggcagaggagctccgcaggctacgtgag
agagagaaggaggaagaggagaaaaagaaaaaagacaaagataagggtaaaaaagggagc
gacagtgacagcagcagtagctcagacgaaggtgtagatgatcatccattgaagaagtcc
aagaaacctcctccacccccgatccctgcgccctcagactctgattctccaccactggct
gaggtaaagaaaccatccaagaagcctgataaccagaagaaggcaagaataaagaaagag
aaggagagaaaagaaaggaaggagaaagagctaaaagagaagaaagtcagacggtcagaa
gagaagcccagagcgaggtctaagcctgaaaaacccaaacgcaaactggagcctgagaag
aaagtggaaaagaaaaaggagccatcgccagaagaaaagctacagaaactccacacagat
ataaagtttgcacttaaagtggacaacccagacatagagcggtgtctacaagccctggaa
gaacttgaggccgtgcctgtcaccagccagatcctccataagaacgctgaagttattgcc
acactgaaaaagattcggcggtataaagccagcactgcagtcatggaaaaagctagtgac
gtctacaacaagttaaaacttcgctttgtgggcaagggggaggtggcagctaaacctaaa
atggagaacaaggaaccagatgacaatgagaaggaaacacaagacacagactccactcca
gtgaacggggattcagaacagaaaacagatgatatggaagaaaaaccaaaatcacctgcc
catgaggagaataatgacgatactgcttcaagtccaaacagacggagcccagagagccct
gctgaacaacagactcacacgtatgaagaagcagaagacaactccatctctgcagagatg
gaaccacctgctgtagaaagctga
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