Siniperca chuatsi (mandarin fish): 122877892
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Entry
122877892 CDS
T08948
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122877892 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122877892 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122877892 (usp13)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122877892 (usp13)
Peptidases and inhibitors [BR:
schu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122877892 (usp13)
Ubiquitin system [BR:
schu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122877892 (usp13)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122877892 (usp13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
UBA_9
Motif
Other DBs
NCBI-GeneID:
122877892
NCBI-ProteinID:
XP_044056011
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All DBs
Position
LG6:15501293..15536234
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AA seq
863 aa
AA seq
DB search
MAADLGELLVPFMPTIRVPRTGDRVFKSECVFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAVPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAFKKQEPESWEEEIQVSRHARSLRQLD
NGVRILPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGSGGNGHALEHYRETNYPLAVK
LDTITPDGADVYSFEEEEAVLDPHISEHLAHFGIDMLQMQKRTENGHHTDNNSRPRVSEW
EVIQESGMKLKAVFGSGYTGIKNLGNSCYLGTVMQVLFSIPDFQRMYVGNLQRIFDYSPL
DPSQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEYKVLNWHQQKGVSPRMLKALV
SRGHPEFSSNRQQDAQEFLLHIINLVERNSAGSENPSDVFRFLVEERVQCCQTRRVRYTQ
RVDYCIQLPAPIEAASNREELLAYEAKRKDAEENMRAPPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFSSFPEYLILQIKKFTFGVDWVPKKLDLAIDVPDFLDLSR
LRATGLQAGEEELPDLLPPIVLPEDTRDNSMGSIDSPEIDEAAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMMDPGPSTSDSPMGATPLGNSPPEESV
AILTSMGFPRAHSIQALKATNNNLERALDWIFTHPEEEESDALSDMADTEPNDNAFSNAN
SHSDSTLSPDRDTSGPRVKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWVIYNDHK
VCLSERPPKDLGYIYFYHRLSSS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctaggagagctgctggtcccattcatgcccaccatcagagtgcccaga
acaggagacagggttttcaagagcgagtgcgtcttttccttcgactctcccgagtcagag
ggaggcctgtatgtgtgtatgaacacattcctcggctttggacgagaacatgtggagaga
cattatcgcaaaacaggacagagtgtttacatgcacctcaaacgacatgtcaaagagaaa
gccacaggagctgcaggaggcgccgtccccagacgaagaaatggaaaagtgtttctagat
ttagagctaaaccgtgattttaacggagaggactatgaatatgaagacgaggccaagctc
gtcatttttccagaccacttcgagatccccttaccaaatattgaggagttgcccgctctg
gtgaccatcgcctgtgatgcagtgctcaatgcaccatcagctttcaagaagcaagagcct
gaatcctgggaggaggagatccaggtgtccagacatgccaggagcctcagacagctggat
aatggggtcaggatcctacccagtggctggaagtgtcagaagtgcgagatgagagaaaac
ctgtggctgaacctgacggatggagcagtgctctgtgggaagtggttctttgatgggagc
ggaggcaatggccacgctctagagcactacagagagaccaactaccctctggctgtcaaa
ctggacaccatcaccccagacggagcagatgtctactcatttgaggaggaggaagctgtg
ttggacccccacatatcagaacacttggcacactttggaatagacatgctacagatgcag
aaaagaacagagaatggtcaccacacagacaataactcccggccgcgggtcagtgaatgg
gaggtgatccaggagtcgggcatgaagctgaaggcggtgtttggttctggttacacaggc
atcaaaaacctgggcaacagctgctacctcggcacagtgatgcaggtcctcttcagcatc
ccagactttcagaggatgtatgtgggtaatcttcagaggatatttgactattcacccctt
gaccccagccaggacttcgccacacaaatggctaaactgggacacggactgctctcaggc
cagtactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaatac
aaggtattaaactggcaccagcagaagggcgtctctccccggatgctgaaggccctggtc
agcaggggacacccagagttttcctccaacagacaacaagatgcccaagagttcctcttg
cacatcatcaacctggtggagaggaacagcgcaggctcggagaatccaagcgacgtcttc
cgcttcctggtggaggagcgggttcagtgctgccagactcgtcgggttcgttacactcag
cgggtggactactgcatccagctgccagcacccattgaggcggcctccaatcgagaggag
ctgctggcatacgaggccaagcggaaagacgctgaggagaacatgcgggctcctcccgag
ccggtgagagcgcggatacccttcacagcgtgcctgcaggccttcacagagccggagaac
gtccccgacttctggagctcagcgctgcaggccaagtcagccggagtcaaaacttcccgt
ttctcctccttcccagagtatctgattttgcagatcaagaaatttacatttggggttgac
tgggtgccgaagaaactagacttggccatagatgttccagactttctggatctgagccgg
ctgcgagccacagggctgcaggcaggtgaagaggagctgcctgacctcctgcctcccatc
gtgctgcctgaagacaccagagataactccatgggctccatagactctccagaaatagac
gaggcggcagtgatgcagctggcagagatgggctttccactggaggcctgtaggaaggcg
gtctactacacaggcaacatgggccccgagatggccttcaactggatcatagcccacatg
gaggagcctgactttgcggaacctctcactctgccctccatgatggatcctggtccctcc
accagtgacagccccatgggtgccaccccgctgggcaactcgccccctgaggagagcgtc
gccatcctcacttccatgggcttcccccgcgctcacagcatccaggcactcaaagccacg
aacaataacctcgaacgagcactcgactggatcttcacccacccggaggaggaggagagt
gacgccctttcagacatggctgacacagagcccaacgacaacgctttctccaacgccaac
tcacacagcgactctacgctgtccccagacagagacacgtcgggcccgcgggtcaaagac
ggaccgggacgttatgagctctttgctttcatcagccacatgggagcatccacaatgtct
gggcattatgtttgtcacatcaaaaaggagggaaggtgggtgatctacaacgaccacaaa
gtgtgtttgtcagaaaggcctccaaaagacttgggctacatctacttttaccatcgactg
tctagcagttaa
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