Siniperca chuatsi (mandarin fish): 122877927
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Entry
122877927 CDS
T08948
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00310
Lysine degradation
schu00514
Other types of O-glycan biosynthesis
schu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122877927 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122877927 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
schu01003
]
122877927 (colgalt2b)
Enzymes [BR:
schu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
122877927 (colgalt2b)
Glycosyltransferases [BR:
schu01003
]
O-Glycan biosynthesis
O-linked Gal type
122877927 (colgalt2b)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
122877927
NCBI-ProteinID:
XP_044056059
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Position
LG6:complement(19702812..19730759)
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AA seq
615 aa
AA seq
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MRAVGAVGVAVLWALLVALVPGGVSELETLVQEPLKAESTLLKPKVMIAIVARNAAHSLP
HYLGCIERLEYPKERIAIWAATDHNMDNTTAMLREWLKGAQSVYHYVEWRPMEEPKSYTD
EWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFVDSDNLLTNPRVLNLLMAENLTVV
APMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFPVPMVHSTFLLDLRRESSR
DLAFHPPHPDYSWAFDDIMVFAFSARQAGVQMYVCNREHYGFLPVPLKAQQNVEDESESF
IHTITEALIDHDIEPSEHLYSPPSLQDTIGFDKIFLINLKRRLDRRTRMLKTMASLGLHA
TLTDAVDGKALNTSQLQALGIEMMPRYKDPYSGRVLTRGEIGCFLSHHSIWIQVLERGLQ
SVLVLEDDVRFEPRFKRRLQAIMDDIDKAQLDWDLIYVGRKRMQVQQPEQSVDGVNNLVE
ADYSYWTLGYALSQQGARKLLAAEPFTRMLPVDEFLPVMFNKHPNTEYMSHFEPRDLKAF
SVEPLLIYPTHYTGEPGYISDTETSTIWDDEAVATDWDRQHARKTAQQGSIRPVAQNSVT
GDSPPPAARASRDEL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggtcggggccgtgggagtcgctgtgctgtgggcgctgctggtcgctctggtg
cccggcggcgtgtcggagctggagacgctggtgcaggagccgctcaaggccgagtctacc
ctgctgaagccaaaggttatgatcgccattgtggctcgtaacgcagcgcacagcctgcca
cattacctgggctgcatcgagaggctcgagtacccgaaggagcgcatagcgatctgggca
gcaacagaccacaatatggacaacaccactgccatgctgagagaatggctgaagggagcc
cagagtgtctaccactacgtggaatggagacccatggaggagccaaagtcctacacagat
gagtggggtccaaagcactggcctccttcgaggttcaaccatgtgatgaagctgagacag
gcggcgctgaaggctgccagggaacgatgggctgactacatactatttgtagacagtgac
aacctgttgaccaacccccgtgtgctgaacctgctgatggctgaaaacttgaccgtggtg
gctcccatgttagagtctcgttcgctctactccaacttctggtgtggcatcaccccacag
ggttactataagcgaaccccagactaccagccgatcagggagtggaagcggctcggctgt
ttccctgttcccatggtgcacagcaccttcttattagacctgcgtcgtgaatccagcaga
gacctggccttccaccctcctcacccggactacagctgggcttttgatgacatcatggtg
tttgctttctcggcacgtcaagcaggtgtgcaaatgtacgtgtgtaacagagaacactac
ggtttcctgcccgtccctctcaaagcacagcagaatgtggaagatgaaagcgagagtttc
atacacaccatcacggaggctttgattgaccacgacattgagccctctgagcacctgtac
tctccgccatcactgcaggacacaataggctttgataaaattttcctgatcaacctgaag
cgtcggctggacagaagaaccaggatgttgaaaacaatggcttcgctgggtctacatgcc
acgctgacagacgcagtggacggcaaggctctcaatacgtcccagctgcaggcgttggga
atagagatgatgccgcgctacaaggacccttactctggccgagtcctgacccgaggggag
attggttgcttcctcagccatcactctatatggatacaggtgttggagcgtggtctccag
agtgttcttgttttagaggacgacgtgaggtttgagcccaggtttaaacgacggctccag
gccataatggatgacatagacaaagcccagctggactgggacctcatctacgtggggcgt
aagcgtatgcaggtgcagcagccggagcagtctgtggatggtgtaaacaacctggttgag
gctgactactcctactggacacttggctatgcgctgtcacagcaaggagccaggaagtta
ctggctgccgaacccttcacaaggatgctgcctgttgacgagttcctgcccgtcatgttc
aacaaacaccctaacactgagtacatgtctcactttgagccacgggacctgaaggccttc
tccgtggagccgctgctcatctatcccacccactacaccggagagccaggctacatcagc
gacacggagacctccaccatctgggacgacgaggctgtggccacggactgggaccggcag
cacgcccgcaagacggcccaacagggcagcatccgccctgtggcacagaacagcgtcact
ggagactcaccgcctcctgcagctcgagcctcacgggatgaactctga
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