KEGG   Siniperca chuatsi (mandarin fish): 122878030
Entry
122878030         CDS       T08948                                 
Symbol
ercc5
Name
(RefSeq) DNA excision repair protein ERCC-5 homolog isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    122878030 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:schu03400]
    122878030 (ercc5)
DNA repair and recombination proteins [BR:schu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122878030 (ercc5)
SSDB
Motif
Pfam: XPG_N XPG_I
Other DBs
NCBI-GeneID: 122878030
NCBI-ProteinID: XP_044056268
LinkDB
Position
LG1:complement(13062390..13073893)
AA seq 1146 aa
MGVHGLWRLLESTGKPINPETLEGKILAVDISIWLNQAVKGVRDREGNSVQNAHLLTLFH
RICKLLFFRIRPVFVFDGDAPLLKKQTLALRRQRKEELSRESKQTNEKLLKTFLKRQAIK
AALGDRSKDPLPSLSSVRRDEMDDMYVLPALPAAEEQDKSSSEEEEDKEEEETTDSFHMY
QGELYGDPNSVDINSEEFASLPPEMKHEILKDMKEFSKRRRTMYHKPPEHSGDFSQYQLA
GLLQRNQLNQHLEGVEKEMSQRSAGNAPQLYQQDGDQQSHSVESHRLVSEDHSHYILIKG
SKKSETAPESQPAAAPWSGSSLSGCKRQAAGRPEPLWRPACEEEDKARGPSSKDSKPSVS
KPSQGDTSPPSPRTLKAIQAAMNDSSDEEKVDRDKKDGSLSPRTLLAIQQALTEEGEGAS
EHRILISSSPTKLQANIQHPVPQVIISSSEEETEPDDMNSLPNEKSEFKGNPTGQSLHVK
DFSLFVSSEDEMEEVIGQRNKALRFAAVQQTHKRERKSEEETKNGQLAENINTGSRGQTE
KEEEELERRESEHGLITKNSNLVQPQGAAPSNRNTLSINASAQIYGKPLRAQTEIHPDDV
KSEGSEESESEESFIEVSEDEFKDEDADDSLVLNKEKGSSDEGRKDGTKKEEKPEESLTE
APSEQAAALKLQEEEDKKRHNEEKELKEGTEKESCSNPAINEWEHFDVDELEALESSLQV
EQSSLRELKQQQERMANTVTGQMYLESQELLRLFGVPFLVAPMEAEAQCAALDRTDHTHG
TITDDSDVWLFGGRHVYKNFFSQNKYVEYYQYSDLQNQLGLDRTKLINLAYLLGSDYTEG
VPGVGYVTGMEILNEFPGPGMEPLTQFSKWWSEAQEKKRLVSDPRDTKVKKKLRDLKLHP
GFPNPVVAQAYLQPAVDESDCFFSWGRPQLDMIKEFCLSRFGWSSRKTEETLQPVIKQLN
TQQTQLRIDSFFRMEQQEKQAIRSQRLRRAVTCMKRKEREGGEEEEEDSEKEMPSPSKSK
KGKAARKSLKKGGEREEERSVAGGGFLGSEVIVEPPLTSLKDVRSSTSQESLSLKAVPQS
TKTLPQRARRRSSSSSSGEDSDAGGEVAMVTAQSVFEGSRRGRGAKSTRGRGSMRGKGRG
TLRGKN
NT seq 3441 nt   +upstreamnt  +downstreamnt
atgggagtgcacggactctggaggctgctggagagtacagggaaacccatcaaccccgag
actctggaaggaaagatccttgctgttgacatcagtatatggctgaaccaggcagtgaag
ggagtgagggaccgtgaaggcaacagtgtccagaacgcccacctgctcactctcttccac
cgcatctgtaagctgctcttcttccgcatcaggccagtctttgtgtttgatggggacgca
ccactgctgaagaaacagactctggctctcaggaggcagaggaaagaggagttgagccgg
gagtccaaacagaccaatgagaaactcctaaagacattcctgaagagacaagctatcaaa
gctgcacttggagaccgcagtaaggatcctctacccagcctctccagtgtgaggagagat
gagatggacgacatgtatgttctaccagccctgccagctgcagaggagcaggacaaaagc
agttcagaagaggaggaagataaagaggaggaggagacgactgacagttttcacatgtat
cagggagagttgtatggagaccccaactcagtggacatcaactcagaggagtttgccagc
ctgcctcctgaaatgaaacatgagatactcaaagacatgaaagagttttccaaaagacgc
cggaccatgtaccacaaacctccagagcattcaggagacttttcccagtaccagttggcc
ggcctgctgcagaggaaccagctgaaccagcatctggagggtgtggagaaagagatgagc
cagcggagcgccggcaacgctccacagctctaccaacaagacggggaccagcagagtcac
agcgtggagtcacaccgactggtgtcagaagaccattcccactatatccttattaaaggc
tccaaaaagagtgagactgcccccgagagccaacctgcagctgcaccctggtctgggagc
tccctgtcaggctgcaaaagacaggcagcgggcagaccagagcccctgtggcgccctgct
tgtgaggaagaggataaagcgcggggtccctcctcaaaagactccaaaccctctgtctca
aagccgtctcagggagacacatcaccgccctcacctcgtacactcaaggcaatccaggct
gcaatgaacgacagctcagatgaggagaaggtggaccgggataagaaggatggtagtttg
tcccctcgcaccctgttggcaatccaacaagccctcactgaggagggagaaggtgcttcc
gaacataggattctaatcagcagctcacccaccaaactgcaggcaaatattcaacatcct
gtgccacaagtgatcatcagcagctcagaggaagagacagaacctgacgacatgaactct
ttacctaatgaaaaatctgaatttaaggggaacccaacaggccaaagtttacacgtgaaa
gatttcagtttgtttgttagttctgaagatgagatggaggaagtgattggtcagagaaat
aaagcacttcgctttgcggcagtgcaacaaactcacaagagagagaggaagtcagaagag
gagacaaagaacggacagttggcagagaatataaacacaggaagtagaggacagacagag
aaagaagaagaagagctggagagaagagaatcagagcacggactgatcacaaagaacagt
aatctggttcaaccacaaggtgctgctccttccaaccgaaacacattatctatcaatgcc
tctgctcagatatatggaaaacctctccgtgcacagactgaaattcatcctgatgatgtg
aagtcagagggcagtgaggagagcgagtcagaagagagcttcattgaggtgtcagaagat
gaatttaaagatgaggatgcagatgattcacttgtattgaataaagagaaaggatcttcc
gatgagggccgtaaagatgggaccaagaaggaagaaaaaccagaggaaagtttgacagag
gctcccagtgaacaagctgctgctttgaaattacaggaagaagaggacaaaaagagacat
aatgaagagaaagagctgaaggagggaacagagaaagaatcctgctcaaatccagcgatc
aatgaatgggaacactttgatgtggatgagctggaggctctggagagctctctgcaggtg
gagcagagcagcctgagggagctgaaacagcagcaggagaggatggcgaacacagtcact
ggacagatgtacctggagagccaggagctgctgcggctgtttggtgtgccgttcctggtg
gcgccgatggaggctgaggctcagtgtgcagcactcgaccgcactgaccacacacacggc
accatcacagacgactcagatgtgtggctgtttggagggcgacatgtctacaagaacttc
ttcagccagaacaaatatgttgaatattaccagtacagtgacctgcagaaccaactgggt
ctggacaggactaaactgataaacctggcttacctgctcggaagtgactacacagagggc
gtgccaggggtcggatatgtgactggcatggagatactgaatgagttcccagggccaggc
atggagccactaacacagttcagtaaatggtggtcagaggctcaggagaaaaagcgtctg
gtgtctgatcctcgggacacgaaggttaagaagaaattgagggacctaaagctgcaccct
gggttccccaaccctgtggtggctcaggcttacctgcaacctgctgtggatgagtcagac
tgcttcttcagctggggacgcccacaactcgacatgatcaaagaattctgtctgagtcgt
tttggctggagcagtcggaagacagaggagacccttcaacctgtgatcaagcagctcaac
acccagcagactcagctgcggatcgactcattcttccgcatggagcaacaggaaaagcag
gcgatccgcagccagcgactccgccgagcagtcacctgcatgaagagaaaggagagagaa
ggaggagaggaggaagaggaggacagtgagaaggaaatgccatccccatccaaatctaag
aaagggaaggcagccagaaagagtctgaagaaaggaggagagagagaagaggagaggtct
gtggcaggaggaggctttctggggtcggaggtaattgttgaacctcctcttacatctctg
aaggatgtgaggagcagcactagccaggagtccctctcattaaaggccgtccctcagtct
actaagactctacctcagagggccaggaggaggagcagcagcagcagctctggtgaggac
agcgatgctggcggtgaagttgctatggttacagcccaatctgtgtttgaaggcagccga
cgaggccgcggagcgaaaagcacaagagggagaggaagcatgagaggaaagggaaggggg
acattgagagggaaaaactga

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