Siniperca chuatsi (mandarin fish): 122878063
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Entry
122878063 CDS
T08948
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122878063 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schu03009
]
122878063 (rexo1)
Ribosome biogenesis [BR:
schu03009
]
Eukaryotic type
Pre-60S particles
RNases
122878063 (rexo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
KIAA1549_1st
Motif
Other DBs
NCBI-GeneID:
122878063
NCBI-ProteinID:
XP_044056324
LinkDB
All DBs
Position
LG6:9838138..9852892
Genome browser
AA seq
1283 aa
AA seq
DB search
MLRSTGFFRGIDCPFYAEYSEGKGSRNGCNRPYCHFRHSQQRRSSYGAPADVKKQRDLHS
AQKDQGYDPFNPEVVRPEEQQNGKPAASGDLSGALELVNKAIEEVRSEVEREKKKLSRIG
DEPYNPSRSTNLSSSDVVKSKTPPSHMAYDPGSYQMTLGGYNPTPGCSKYTLDSDNQGNN
SNSMEYVPSSVKKPPSRTHTHQLPSPPPSPKYSNSTSSSKCKYTVDISKPSTDMEYDPLS
NYAAGITVKRKRDKCAQAVKTMGRKTHKLPGSDMSDEECVVAVKKTRQQSVDSKKYTFSN
SDGESSGTEYRPTSLSNLQRRKGNSGSLWDAVGKERKERTESLLNALTQRNKEDLAGDSD
VPEDIKRKDSLEKKKVASRTSHEKSGKSEKVHKLEKEVNKTTGSKSSSSSSSKDKGSMKN
SNQDSAKKENKSHGKRDDRKNTVKVKTSDKVQREVRDEKRSDGKVKAVGKVKTDSSKRDK
DTENGARESKKPKISDKEKELSRYKDRQHKNGKLDSSKREKDVKKFSKSSSSSASSSSNS
KGSSANSKDKVRQNISSSNGKRLEDKRRSLSLSHADLFGDESPEEAEPIEVDDDDDYDDD
DDEEPEEVLVRKSADALKRGRLNKRKASELTPSSTDDEDDGGVEGSRPGKDEVDAVGFDF
SSFQDDLDFDSDPMEECLRIFNESKEVKREDKGRQTKQPSRDSEDEKSTESTLTTLFPGQ
KKRVSHFVAKGNTDAPSKKNVMRPYKRLTAQEVCYQRMQMAQQQAAQLSASVKADPQSSS
ASFSGERKRIAHRPNPQITSSKTTPADVTPAASRVLSPSQTHQTVKAQTTAGILSKTVST
VMQKRVAHTPTMKSGSMKRPIIPTEFGAKVPTNIRQRYLNTFIDECVKFCQSEDVAFQMA
LDEEKLVYERSSSKNIYLNVAVNTLKKLRSKSSSCASPVTKDPGSVANRRAQSHEEVLGG
RLAATTSFTVNRMGKQQEEKLIGATLYRKLKAYMMTEEQLQEHGYPRTNPEAPGKAVIYN
LPEKKAISDPLNKICCRCGAEYKINVNGNCIRKEECSFHWGRLRRHKVAGGWETNYSCCA
AAVGTPGCQVSKQHVQDGRKESFDGYVTTFSKALPPDGNGGVFALDCEMCYTRQGLELTR
VTVIDSEMKVIYDTFVKPESKVVDYNTRFSGVTEEDLENVTISLRDVQAVLLSMFSAESI
LIGHSLESDLLALKLIHSSVVDTSIVFPHRLGLPYKRALRNLMADHLKRIIQDNVEGHDS
SEDASACMELMIWKIKEDAKVKR
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgctaagatccaccggcttcttccgagggattgactgtccgttttacgcggagtacagc
gagggcaaaggaagcagaaatgggtgcaacagaccgtactgtcacttcaggcacagccag
cagagacggtcgtcctacggagctccagcagatgttaaaaagcaaagagaccttcactcc
gcacagaaagatcaaggttatgatcccttcaacccagaagttgtgaggcctgaggagcag
cagaatggaaagccagctgcctcaggagacctcagtggtgctctggaactggtcaacaag
gccatcgaggaggtccggagcgaggtggagagggagaagaagaagctctctcggattggg
gatgaaccatacaatcccagcaggagtaccaatttgtcttcatctgatgttgttaaaagt
aaaacaccaccttcacacatggcctatgaccctgggagttatcagatgacattgggaggt
tataatcccacccctggctgcagcaagtatactttggattcagacaaccaggggaacaat
agtaactccatggaatatgttccttcttcagtgaaaaagcctccatctcggacacacaca
caccaactcccctctcctccccccagtccaaagtactccaacagcacatcctcctctaag
tgtaaatacactgtggacatttcaaaaccatctacagatatggagtatgacccgctgtcc
aactacgcggcaggaatcacagtgaaacgcaagagggacaagtgtgcacaagctgttaag
acgatgggaaggaagacacacaaattaccaggatcagatatgtcagatgaggagtgtgtt
gtagctgtgaaaaaaacacgacagcagagtgtagattcaaagaaatacactttctctaac
tctgatggggagagctctggaacagagtatcgacccacgtcacttagtaatctccagcgg
agaaaaggcaacagtgggtcactttgggatgctgtggggaaggagagaaaagagagaact
gaaagtttgcttaatgcactgacacagagaaataaagaggacttggcaggggactcggac
gtcccggaagatattaaacgaaaggacagcctagagaaaaagaaggtggctagtcgaact
agtcatgagaaaagtggcaaatctgagaaagtgcataaacttgaaaaggaagtaaacaaa
acaactggtagtaagagtagtagcagcagcagcagtaaagacaaagggtcaatgaagaac
tcaaaccaggactctgcaaagaaagagaacaagagtcatggaaaaagagatgataggaaa
aacacagttaaggttaagacatctgataaagttcagagggaagtaagagatgaaaagaga
agtgatggtaaggtcaaagctgtgggaaaagtaaaaacagactcaagcaaacgagataaa
gatacagaaaatggtgcaagggaaagcaagaaacccaagatatcagacaaggaaaaggaa
ctcagcaggtataaggaccgccaacacaaaaatggtaaacttgatagcagtaaaagagaa
aaggatgtaaagaaatttagtaaaagcagttctagtagcgcgagcagtagtagtaacagt
aaaggtagttctgcaaacagtaaagataaggtgaggcaaaacatcagctcatcaaatggg
aaaagacttgaggacaaacggcgaagtctgagtctcagccatgctgatctgtttggagat
gagagcccagaggaggccgaaccgatagaggtggatgatgatgatgattacgacgacgac
gacgacgaggaacccgaagaagtgctggtgagaaaatctgctgatgctttaaagagggga
cgtctgaacaagaggaaagcgtcagagctgactccgtcttccactgacgatgaggatgac
ggtggtgtggagggcagcaggccaggtaaggacgaggttgatgctgttggattcgacttt
tctagtttccaggacgatctggactttgactcagatcccatggaggagtgtttgcggatc
tttaatgaatccaaggaagtgaagagggaagacaagggaaggcaaactaaacagccctct
agggattcagaggacgagaaaagcacagagagcactttaaccactctctttcccggtcaa
aagaagagagtctcccattttgttgccaaaggaaatactgacgcaccttcaaaaaaaaat
gtgatgcggccgtacaagagactcacagcccaggaggtctgctaccagcgtatgcagatg
gcacagcagcaagctgctcagctttctgcttcagtcaaagctgatccacagagctccagc
gccagcttttctggagagaggaagagaatagcgcaccgccccaacccacagataacatcc
tctaaaacaactcctgcagatgttacaccagctgccagtcgagtgttatcccccagccag
acccatcagactgtcaaggcccaaaccaccgctggcatcttgtccaagaccgtgtccact
gtcatgcagaagagggtggcgcacacacccaccatgaagagtggttcaatgaagcgcccc
atcatccccactgagtttggggccaaagttcccaccaacatccgccagcgctacctcaac
actttcatagatgaatgtgtcaaattttgccaatcagaggacgttgccttccagatggcc
cttgatgaggagaaacttgtgtatgagcgcagtagcagcaagaacatctacctcaatgtc
gctgtcaacactctgaagaagctccgctccaagagcagctcctgtgcatcgcctgtcacc
aaggacccagggtcagttgcgaacaggagggcccagtcccacgaggaagttctgggaggt
cgtcttgctgctacaaccagcttcactgtcaacaggatgggtaaacagcaggaggagaaa
ctcattggagccacactgtacaggaagctgaaggcgtacatgatgacggaggagcagctt
caggagcacggatacccgagaacgaaccctgaggctcccggcaaagccgtcatatacaac
ctcccagagaaaaaggccatttcagacccgctcaacaagatatgctgtcgatgtggagca
gagtataagatcaatgtcaatggcaactgtatacggaaagaggaatgtagctttcactgg
ggacgattgcggagacataaagtcgctggaggctgggagaccaactacagctgctgtgct
gcagctgtgggcacgccaggttgccaggtttccaagcaacatgttcaggacgggcgtaaa
gagtcatttgatggctacgtcacaacgttcagtaaagctctcccaccagatggcaatgga
ggggtatttgctttggactgtgagatgtgttacacaaggcagggcctggaactgacgaga
gtgacagtcattgactctgagatgaaagtcatctacgacacatttgtcaaacctgaaagc
aaagtggttgattacaacacacgattttcaggtgtgacggaggaggacttggagaacgtc
accatcagtctgagagatgttcaggcagtgctgctcagtatgttcagtgctgaatccatc
ctcataggacacagtctggagagcgacctgctcgctctgaagctaatccacagttcagtc
gtagacacgtccatcgtgttccctcaccgcctcggcttgccctacaaacgtgccttgagg
aacctgatggccgaccacctcaaacgcatcatccaggacaacgtggagggccacgactcg
agcgaagatgcatctgcctgcatggagctgatgatttggaagatcaaggaggatgcaaag
gtcaaaagatga
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integrated database retrieval system
