KEGG   Siniperca chuatsi (mandarin fish): 122878098
Entry
122878098         CDS       T08948                                 
Symbol
ell
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122878098 (ell)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:schu01009]
    122878098 (ell)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:schu03021]
    122878098 (ell)
Protein phosphatases and associated proteins [BR:schu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122878098 (ell)
Transcription machinery [BR:schu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     122878098 (ell)
    Little elongation complex (LEC)
     122878098 (ell)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing Seryl_tRNA_N DUF6902 STAT_alpha
Other DBs
NCBI-GeneID: 122878098
NCBI-ProteinID: XP_044056378
LinkDB
Position
LG6:20071214..20109331
AA seq 645 aa
MAALKEEQCYGLSCGRVSNGSNVSVFHVKLTDSALRAFEGYQSSKVLSSRPLIRFNGNQG
KISIPRSENSSELQSFTFYLSNVGRDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVC
ATDDSYQKARESMAQVEEETRSRSAIVIKPGGRYVGKKVQIRKPAPSLSDIAPLRRTSRP
VIISSSTLKKGTTQHRPLRERLIHLLALKPYKKPELILRLQKDGLLQLDKDSLDSHLQQV
ANLNGRDNIFTLKEFLYKEIQKDWPGYTEGDQQLLKRILFRKQGPAQNSSAPPLESPPKE
LASSSPSQKRPAADFIDPLVNKKPRISHLASKAATAPVNGKLSSSNGRGEAGGAQAGVAV
SMSDGGMTSSSQQLPVLDIPRPFEALSDVSNDSSHNGRDCDSQESAVSERLSQPPSLFSG
STTLTAPSIGTSSPRHTGLEGPRDKSPSTFNKSRKKSKKHKDKEKSKDRDRERVRERAQE
KEKKSREVRVPEPNRACEMSPGNLKSNSIPHKSTDLNGMCNSTSIPSSSPEVADYLLKYT
VIGSPEQRQRYKNDFNAEYSEYRGLHARIEGITRQFTVLDNELKQLQHGTDKYKTIHNQI
LQEYHKIKKTNPNYSQEKNRCEYLHNKLAHIKRLIAEYDQQQLQK
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaggagcagtgctacggactgtcctgtggaagagtgagcaacggt
agcaatgtctccgtctttcacgttaaactcactgacagcgcactgagagcgtttgaaggc
taccagagcagcaaggtcctgtcatcacgaccattgatcaggtttaatggaaaccaaggg
aaaatttcaataccacggtcagaaaattccagtgaactgcaatcgtttactttctacctg
tcgaatgtgggcagagataacccccagggcagcttcgactgcatccagcagtacatcacc
agtgaagggagcattcagctggattgtttgggtgggatccaggacaagattacagtatgt
gccacagatgactcctaccagaaggccagggaaagcatggcccaggttgaagaggagact
cgcagtaggagtgccattgtcatcaagcctgggggaagatacgtaggtaagaaggttcag
atccggaaaccggcacctagcctctctgacatcgccccgttacggaggacatctcggcct
gtcatcatctctagcagtacgctaaagaagggcacaactcagcacaggccactccgagag
cgcctcatacacctgttggccctcaagccttacaagaagcctgagctgatcctgaggttg
cagaaagatggcctcttgcaattagacaaggactccctggatagccacctgcaacaggtg
gcaaacctgaatgggagagacaacatcttcacattgaaggagtttttgtataaggaaatt
cagaaggactggccaggctacacagaaggagaccagcagcttctcaagagaatcctgttt
aggaaacagggcccggcccagaacagctctgcccctccactggagagcccgcccaaagag
ctggccagcagctcgccatctcagaaacgtcctgctgctgacttcatcgaccctcttgtc
aacaaaaagcccaggatatcacacctcgccagcaaggctgcaacagccccagttaatggc
aagctcagttcctccaacgggagaggagaggcaggtggtgcacaggcaggagtggcggtc
tctatgtcagacggcggcatgacgtccagctcccagcagctccctgtgctggacatccct
cgtcctttcgaagcactgtcggacgtcagcaacgactccagccacaacgggagagattgt
gactctcaggagtcagcagtgtccgagaggctaagtcaacctccttcactattctcgggt
tcaacgacgctcaccgcgcctagcatcggcacatcatctcccagacacacaggcctggaa
ggccctcgggacaagagtccttcaacgttcaacaagtccaggaagaagtcaaaaaagcat
aaagacaaggagaagagtaaagacagggacagggagagggtgagagagagggcacaagag
aaggagaagaaaagtcgtgaggtgcgtgtgcctgagcctaacagagcctgtgagatgagc
ccaggaaacctcaaaagcaacagtattccacacaaaagcacagatctgaatggaatgtgc
aacagtaccagtattccttcgtcatcacctgaggtggcagactatttattgaagtacaca
gtgatcggctctccggagcagcgccagaggtataaaaatgatttcaatgccgagtacagc
gagtaccggggtctgcatgctcggatagagggcatcactcggcagttcactgtgcttgac
aatgagctcaaacagctccaacacggcacagacaagtacaagacaatccacaatcagata
cttcaagagtatcataaaataaaaaagactaatccaaactatagccaagagaagaaccgc
tgtgaatatctacacaacaaactggcacatataaagagacttattgcagagtacgatcaa
cagcaacttcaaaagtag

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