Siniperca chuatsi (mandarin fish): 122878115
Help
Entry
122878115 CDS
T08948
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schu03009
]
122878115 (ddx49)
Enzymes [BR:
schu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122878115 (ddx49)
Ribosome biogenesis [BR:
schu03009
]
Eukaryotic type
90S particles
Helicases
122878115 (ddx49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
P-loop_SecA
Laminin_B
Motif
Other DBs
NCBI-GeneID:
122878115
NCBI-ProteinID:
XP_044056406
LinkDB
All DBs
Position
LG6:10701473..10709135
Genome browser
AA seq
479 aa
AA seq
DB search
MADFSSLGLSDWLVKQTKQLGINKPTPVQEHCMPAILQGRDCMGCAKTGSGKTAAFVLPV
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLRDCIIVGGMDMVSQAMELSNQ
PHVVVATPGRLADHIRSSDTFSMSKIQFLILDEADRLLEQGCTDFTKDLETILGILPAKR
QTLLFSATLTDTLHDLKNIAMNKPYFWESTSETRTVEELDQRYILTPEKVKDAYLVHLIQ
KFTDEHDDWSIIIFTNTCKNCQILTMMLREFNFPTISLHSMMKQKQRFANLAKFKASVYK
ILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLV
HSIEEQNKTKLKEYHVEEKEVLKILTQVNVTRRECEIKLESTDFDEKKEINKRKQLILEG
KDPDLEAKRKAELEKIRSQKKKFQQKIQESFQKQKRGQLKRKLMKRKQMKKKKVAQATA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctgacttttcgtcgctgggtctctcagactggctggttaaacagaccaaacagctg
ggaatcaacaaacccactcctgttcaggagcactgcatgccagctatactacaaggtcgg
gactgtatgggctgtgctaagacaggaagtgggaagacagcagcatttgtgctgccagtg
ctgcagaaactgtcagaggacccatatggcatcttctgcttggtgctcacacctaccagg
gagctcgcctatcagattgcagagcagtttcgagtcctggggaagcctcttggtctgaga
gactgcatcatcgtcggcggaatggacatggtgagccaggccatggagctgtccaaccaa
ccacacgtggttgtcgcgacaccgggccggcttgctgatcacatccgcagctccgacacc
ttcagcatgagcaagatccagtttctgattttggacgaggcggaccggctgttggagcag
ggctgcactgacttcaccaaagacctggagacgatcctggggattttaccggctaaacgg
cagacgctactgttcagtgccacgctcactgacaccctgcatgatctgaagaatatcgcc
atgaacaaaccttacttctgggagagcacatcagaaacacgaacagtggaggagctggac
cagaggtacatcctcactccagagaaggtgaaggacgcctacctggtccacctgatccag
aagtttactgacgagcatgacgactggtccatcatcatcttcaccaacacgtgcaagaac
tgccaaatcctcaccatgatgctgcgggagtttaactttccaaccatttccctgcactcc
atgatgaaacagaaacaacgatttgcaaacctcgccaagttcaaggccagcgtctacaaa
atcctgattgcaacagacgtggccgccaggggtttggatattccaactgtccaggttgtc
atcaaccacaacacccccggccttcccaagatctacatccacagagttggacgaacagca
agagcagggaggaatggagtgtccatcacactggtgacgcagtacgacatccacctggtc
cactccatcgaagaacagaacaagacaaagctgaaggaataccatgtggaggagaaagaa
gtcctgaagatcctgacccaggtcaacgtgaccagacgggagtgtgaaataaaacttgag
tcaacagattttgatgagaaaaaggagatcaacaaaaggaaacagctgatcttggagggg
aaggatccagacctggaggccaagaggaaggccgaactggagaagatcaggagccagaag
aaaaagttccaacagaaaatccaggagagctttcagaaacagaaacgtggacaactgaaa
aggaaacttatgaagagaaaacagatgaaaaagaaaaaggtggcacaggcaacagcgtga
DBGET
integrated database retrieval system
