Siniperca chuatsi (mandarin fish): 122878156
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Entry
122878156 CDS
T08948
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04145
Phagosome
schu04510
Focal adhesion
schu04512
ECM-receptor interaction
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122878156
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122878156
09144 Cellular community - eukaryotes
04510 Focal adhesion
122878156
09142 Cell motility
04820 Cytoskeleton in muscle cells
122878156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122878156
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122878156
00536 Glycosaminoglycan binding proteins [BR:
schu00536
]
122878156
Membrane trafficking [BR:
schu04131
]
Endocytosis
Phagocytosis
Opsonins
122878156
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122878156
Exosomal proteins of colorectal cancer cells
122878156
Exosomal proteins of bladder cancer cells
122878156
Glycosaminoglycan binding proteins [BR:
schu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122878156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
122878156
NCBI-ProteinID:
XP_044056499
LinkDB
All DBs
Position
LG6:11386085..11408133
Genome browser
AA seq
748 aa
AA seq
DB search
MLWFLVVTCALCTGGHVAAGQRDGEIISQIKMTNLALAEIKELLTQQIKEIVFLKNTVME
CEACGMGGMQPRPSCVPNPCYTGVKCKETPQGIKCGPCPEGMEGNGTHCTDVDECTVMPC
HMGVRCINTSPGFRCGTCPAGYTGPQVQGVGLAYATANKQVCKDINECESSNNGGCVVNS
VCMNSPGSFRCGPCKTGYVGDQRRGCKPERACGNGQPNPCHASAECTIHREGTIECQCGV
GWAGNGYLCGSDIDIDGFPDEKLDCPERNCNKDNCLTVPNSGQEDADGDGIGDACDEDAD
GDGIPNTQDNCVLVPNVDQRNIDEDDFGDACDNCRAVKNNDQKDTDVDKFGDECDEDIDG
DGIPNYLDNCKRVPNADQIDRDGDKVGDACDSCPYVPNPDQMDVDNDLIGDPCDTNKDSD
GDGHQDSRDNCPAVINSSQLDTDKDGLGDECDDDDDNDGIPDLLPPGPDNCRLIPNPLQE
DSNGDGVGNVCERDFDNDTINDPIDVCPENAEVTITDFREYQTVVLDPEGDAQIDPNWVV
LNQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVM
WKQVEQIYWQANPFRAVAEPGIQLKAVKSTTGPGENLRNALWHTGDTSDQVKLLWKDARN
VGWKDKTSYRWFLQHRPADGYIRVRFYEGPQMVADTGIIIDATMRGGRLGVFCFSQENII
WANLRYRCNDTLPEDFDSYRAQQVQLAV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggtttctggtggtgacctgtgcgctctgcacgggaggacatgttgcagcagga
cagagagatggagaaattatcagtcagattaaaatgacgaaccttgcactggctgaaatt
aaagagcttctgacacaacagataaaagagatagtattcctgaagaacacagtgatggag
tgtgaagcctgtgggatgggaggaatgcagcctcgtccatcctgtgtgcccaatccctgc
tacacaggggtgaagtgtaaggagacacctcagggtattaagtgtggaccctgtcctgaa
ggcatggagggcaatggtacccactgcactgatgtggacgagtgtactgtgatgccgtgt
cacatgggtgtgcgctgcataaacacctccccgggtttccgctgtggtacctgtcctgct
ggatacaccggcccccaagtccagggcgtcggcctcgcctacgccactgccaacaaacag
gtgtgcaaagacatcaatgagtgtgaaagctccaacaatggaggctgtgtggtgaactct
gtctgcatgaacagccctggctcgttcaggtgtggtccctgtaagacaggctacgttggg
gatcagagacgtggctgtaagccggagagagcctgtgggaatggccaacccaacccctgc
cacgccagcgctgagtgcaccatccatcgagagggtacaatcgagtgtcagtgtggagtc
ggatgggctggcaacggctacctctgtgggtctgacattgacatcgatggtttccccgat
gagaaactagactgtcctgagaggaactgtaacaaggataattgtctcactgtgcccaac
tctggccaagaagatgctgacggtgatggaattggagacgcttgtgatgaggatgcagat
ggtgacgggatccccaacacacaggataactgcgtgttggtgcctaatgtggaccagagg
aacattgatgaggacgactttggtgatgcctgcgacaactgccgcgctgtcaaaaacaac
gaccaaaaagacacagatgtggacaaatttggtgatgaatgtgatgaagacattgatggt
gatggaatccccaattacctggataactgcaaaagggttcccaacgctgaccagatagat
cgtgatggcgacaaagtgggagacgcctgcgacagctgtccttatgttccaaaccctgac
cagatggacgtggacaacgacttgattggagacccctgtgacaccaacaaggacagtgat
ggtgacggccaccaagactctcgggacaactgtccagccgtcatcaacagctcccagttg
gacaccgacaaggacggcctgggagacgagtgcgatgacgatgatgataatgacggcatc
ccagacctgctgccacctggtcctgataactgccgtctgatccccaaccctctgcaggag
gactctaatggcgatggtgtgggtaatgtatgcgagagggatttcgacaacgacactatc
aacgaccccatcgatgtttgtccagaaaatgctgaggtcaccatcacagacttcagggag
taccagaccgtcgttctagatccggagggagatgcacagatcgaccccaactgggtggtg
ctgaaccagggaagagagattgtccagactatgaacagtgatcctggcttggctgttggt
tacactgctttcagtggcgtggattttgaagggacgtttcatgtaaacacagtaacggat
gatgactacgcaggatttatcttcgggtaccaggacagctccagtttctacgtggtgatg
tggaagcaggtggaacagatctactggcaggcaaatccgttcagagccgtggcagaacca
ggcatccaactgaaggctgtcaagtccaccacgggtccaggtgaaaacctgaggaacgcc
ctgtggcacaccggcgacacgagtgaccaggtcaaactcctgtggaaagatgctcgcaat
gttggctggaaggacaagacttcgtaccgctggttcctccaacaccgacctgctgacgga
tacatcagagttcgtttctacgagggtcctcagatggtggcggacacaggcatcatcata
gacgccacaatgagaggaggtcgactaggagtcttctgcttctcgcaggagaacatcatc
tgggccaacctgcgttatcgctgcaacgacactcttcctgaggactttgactcctacaga
gcccagcaggtccagctggcggtctga
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