KEGG   Siniperca chuatsi (mandarin fish): 122878165
Entry
122878165         CDS       T08948                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:schu03036]
    122878165 (kdm4b)
Enzymes [BR:schu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     122878165 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     122878165 (kdm4b)
Chromosome and associated proteins [BR:schu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122878165 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF4537 53-BP1_Tudor Tudor_5
Other DBs
NCBI-GeneID: 122878165
NCBI-ProteinID: XP_044056520
LinkDB
Position
LG6:11664987..11719893
AA seq 1277 aa
MATDMPMDTVPAPHPAPASPPDSAPASPPALSSSTSQDQIPTQEPAIAETPNTAVTSEHD
AAPDLTLAQSTDPDAAPGLVPGSELSPIPLLPPVSAKNPSCKIMTFRPTMEEFKDFAKYI
VYMESQGAHRAGLAKVIPPEGWKPRRSYDTIEDMVIPAPITQVVTGQSGLFTQYNIQKKS
MTVGEYRKLANSKKYCTPQHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEDIREWNIG
HLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQSKSWYAV
PPEHGKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYGIPFDRITQNEGEFMITF
PYGYHAGFNHGFNCAESTNFATLRWVDYGKMATQCTCRKDMVKISMDVFVRCLQPDRYEL
WKQGKDTTMLDHLRATELSSPELETWRQQRVNHRANLLRRAMQKMKQVRRLKLEEVKVLA
EEGIELNAAEYQHQVEEREAQRRQEREERLAREAMMTLEAMEREEQEAAEAAAKAAETPA
VEAQEPKAKPQNLTEDIEKKKQKKPKKMSNIRNAMTGFEQAFEQFATSGIKNSKQAMVSH
PEVGKPLNPRQSDIPADNKLDVSATQACYSKMKMPTEVKKSRRHPLSKPPMRSPLSIVKQ
EPTSDKELSSPMPLDSNMKKQEHLWQNHSPNFLAEKAFNAAVAALQPHCSICSLFCPYTK
PHKDVFIANDTHRASFPRHGSLTRPLVPEMCFSAGNTEPSPTNYHIGEDGTSLLLCCSSC
HMQVHASCYGVKPDSVSESWMCSRCEAGAWTVECCLCNLRGGALKTTTDNRWVHVICAIA
VAEARFVKAIEREPVDVSAVPETRKNLKCVFCHGKNANQNRGACIQCSYENCATSFHVTC
AQIAGVVMKPADWPYVVSVTCHRHKRATPKPRTAPKGPQSLNLGQRVIGRNSDGWYYHCT
IIGMATQNFYEVNFDDGSYCDNLHPENILSHDCLRTGPPEVGELLVVHTPEGQVLSASFV
RQHTQKLYQVEFQEQSQLMLKHSEIHQLDQELPKRVRARLAIPAAKEEVSSADEVQAAKR
RRLPSGSALPAETPMETTDKPACLLTTGPVAAPAAKHHSISTPLTSQPLSQATTTPQDAP
TPTSGIQMDTETPMDTSATLTDILTESTLASDPTLTPQSTPFQSRLNSDPLLSASSLPRR
PSTCLTATCRAAATFPTWRPSSIHISLRTMAPDPCIKNHLHYIITQPVEAEPIGSKLMEV
DSTECCINGQKHFLHQL
NT seq 3834 nt   +upstreamnt  +downstreamnt
atggctaccgacatgcccatggacacggtgccggctcctcaccctgccccagcctcaccc
cctgactctgccccagcctcacctcctgctctcagctccagcacatcccaagaccagatt
cccacccaggagccagcaatagctgaaaccccaaacacagcggtgacctcagaacatgat
gctgctccagatctcaccctggctcagtctacagacccagacgcggccccaggccttgtt
ccaggttctgagctgtccccgatccctctgctgccaccagtcagtgccaagaaccctagc
tgcaagatcatgacgtttcggcccaccatggaggagttcaaagacttcgccaaatacatt
gtctacatggagagtcaaggagctcatcgtgctggcctggcaaaggtgattcctccagag
ggctggaagccgcggaggtcctacgacaccatcgaggacatggtgattccagcccccatc
acgcaggtggtgaccggacagtcgggtctgttcactcagtacaacatccagaagaagtct
atgaccgtgggcgagtaccgcaagctggctaacagcaagaagtactgcacaccccagcac
aaagactttgacgacctagagaggaagtactggaagaacctgacatttgtgtcacccatt
tatggtgcagatgtcagtggctccatctatgatgaggacattcgggagtggaacattggc
catctcaacacactactggatatggtggagcaggagtgtggcatcgtcatcgagggtgtc
aacactccctacctgtactttggcatgtggaagaccacatttgcctggcacacagaggac
atggacctctacagcatcaactacctgcactttggacagtcgaagtcctggtatgccgtc
ccacctgagcacggcaagaggctggagaggctggcacaaggcttcttccctggcagctcc
caaggctgtgacgccttccttcgccacaagatgacactgatatctccatccatcctgaag
aaatacggcattccctttgacaggataactcagaatgaaggggagtttatgatcactttt
ccttatggctaccatgctggcttcaaccatggcttcaactgtgcagagtccacaaacttt
gccaccctgcgctgggtggactacggcaagatggctacccagtgtacctgtcgtaaagac
atggtcaagatctccatggacgtgtttgtgcgctgcctgcagccagatcgctacgagctg
tggaagcagggcaaagacaccacaatgttggaccaccttagggccactgagctcagcagc
cccgaactagagacctggaggcagcagcgtgtaaaccaccgagcaaacctcctgcgaagg
gccatgcagaagatgaagcaggtccgtcgtctaaagctggaggaggtgaaggtgctggcg
gaggaaggcattgagctgaatgctgctgagtaccagcatcaggtggaggagcgcgaggct
cagcggaggcaggagagagaggagcgtctagccagagaggccatgatgaccctggaagcc
atggagcgtgaggagcaggaagctgccgaggctgcagctaaagcagcagagactccagct
gtagaggcacaagaacccaaggccaaaccacagaacttgacagaggacattgagaaaaag
aagcagaaaaagccgaagaagatgtcaaacatccgcaacgccatgactgggtttgagcaa
gcatttgagcagtttgctacatctggcatcaagaattccaaacaagccatggtcagtcat
ccagaagtggggaaaccgcttaacccaagacagagtgacatcccagcagacaacaagctg
gatgtgagcgccacccaggcatgctactccaagatgaagatgccaacagaggtaaaaaag
agtcgccgccaccccctcagcaagccacccatgcgctcccctctgtccatcgtcaagcaa
gaaccgaccagtgacaaagagctgtcctcccccatgccactggacagcaacatgaagaaa
caagagcacctttggcagaatcactcacccaacttcctggcagagaaggcctttaatgct
gcagtggcagcactccaaccacactgctctatctgttcactcttctgtccctacacaaag
ccacacaaagatgtctttattgcgaatgacacccatcgcgcctcctttccccgtcatggc
agtctgactcgtccactggtcccagagatgtgcttcagcgcaggcaatactgagccttca
cccaccaactatcacattggagaggatggaaccagtcttctgctctgctgttcatcttgc
cacatgcaggttcatgccagttgctatggtgtaaagccagactctgtcagtgagtcctgg
atgtgctccaggtgtgaagcaggagcctggacagtggagtgttgcctctgtaacctgcgt
ggaggagctttgaagactaccacagacaaccggtgggtccatgtcatctgtgccattgct
gtggctgaagctcgcttcgtcaaagccattgagagagagccagtggatgtcagtgctgtt
ccagaaacgcgcaagaatctgaagtgtgtgttctgccacggcaagaatgccaatcagaac
cgcggcgcctgtatccagtgctcatatgagaactgtgccacctccttccacgtcacctgt
gcccaaattgccggagtagtcatgaagccagccgactggccctatgtggtgtccgtcacc
tgccacaggcataaaagggccactccaaagcctcggacagcacccaaaggcccacagagt
ctgaacctgggccagagggtgattggtcgcaacagtgacggttggtactaccactgtacc
atcatcggcatggcaacgcagaatttctacgaggtcaactttgatgacggctcatattgt
gacaaccttcacccagaaaacatattaagtcatgactgcctgcgtaccggtcctcctgag
gtgggggagttgcttgtggtccatacgcccgagggtcaggtcctcagcgcttcctttgtt
agacagcacactcaaaagctctaccaggttgagtttcaggagcagagtcagctgatgcta
aaacactcagagatccatcagctggaccaggaactgcccaagagggtcagagccagactg
gccatacctgctgcaaaggaggaggtatcctcagcagacgaagtccaagcagccaaacgg
cgccgcctgccttcaggctcagccctgcctgctgaaacccccatggagacaaccgataag
cccgcctgcctcctaactacaggcccggtagcagcaccagcagcaaaacatcacagtatt
agtacaccgctgacctcacaacctctgtcccaggccaccacgaccccacaggatgccccc
accccaaccagtggtattcagatggacactgagaccccaatggacacgagcgccaccctc
actgatattctaacggagtcaaccctggcctcagaccccacgctgactccacaatcgacc
ccttttcagtcgaggttgaactctgaccccctcctgtccgcctcgtccctcccccgccgc
cccagcacatgtctgacagctacatgccgagcagcggctacgtttcctacatggagaccc
tcctccattcacatttccctcaggacgatggccccggacccctgtattaaaaaccatctc
cactatattattactcagccagtggaggctgagccaataggaagtaagctaatggaggtg
gattctactgagtgctgtattaatggacaaaaacatttcctccaccagctgtga

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