Siniperca chuatsi (mandarin fish): 122878190
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Entry
122878190 CDS
T08948
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122878190
04121 Ubiquitin system [BR:
schu04121
]
122878190
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122878190
Membrane trafficking [BR:
schu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122878190
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122878190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
Zn_ribbon_19
zf-Nse
zf-RING_16
EHMT1-2_CRR
Motif
Other DBs
NCBI-GeneID:
122878190
NCBI-ProteinID:
XP_044056579
LinkDB
All DBs
Position
LG6:complement(21019082..21026373)
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AA seq
352 aa
AA seq
DB search
MEGGETQLILSAVLSVCCRGLQTTVPIPDSDTAGQDTFNGVPTGWGGKACSLQSFQHPLE
YTCPRCESGFIEELLEERSADNGSMPTISSGPQNQQPYENVDQHLFTFPSGYGQFALGVL
DDRFDFGAGLGTEDNRDAENRRERETASQHRYGARQPRSRHGSRRQAGRHEGVPTLEGII
QQLVNGIIAPTAMPNIGVGPWGVLHSNPMDYAWGANGLDAIITQLLNQFENTGPPPADRD
KIKSLPTVQITDEHVASGLECPVCKEDYSVGENVRQLPCNHMFHNDCIVPWLEQHDTCPV
CRKSLSGQNTATNPPELSGMNFTSSSSSSSSSSSSTPQSSSSTSNENSTDNS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggagagacccagttgatcctctcagctgtcctcagtgtttgctgcaggggc
ttacagaccacagttcccataccagatagtgacacagctggtcaggacactttcaacggt
gtcccaacaggatggggtgggaaggcttgctcgcttcagtcttttcagcatcctctagag
tacacatgtccaagatgtgagtcagggtttattgaggaactgctggaggagagaagtgct
gacaatggctccatgcctaccatctccagtgggccccagaaccagcaaccatatgagaat
gtggaccagcacttgtttacattcccttccggctatggtcagtttgccctgggtgtcttg
gacgaccgctttgacttcggggctggactgggaacagaggacaaccgggatgctgaaaac
aggcgggaaagggaaacagcatcacagcatcgatatggtgccaggcagccgagaagtcgt
catggttcaagacgacaagcagggagacatgagggagttcccactttagagggaatcatt
cagcagctagtgaatggaataattgcacctactgcaatgccaaatattggtgttggaccc
tggggtgttcttcactcaaatcctatggattatgcctggggtgctaatggactagatgca
attataactcagttattaaaccagtttgagaacacgggacccccacctgctgatagagat
aaaataaaaagtcttcctacagtacaaattacagatgagcatgttgcttcaggattggaa
tgtccagtgtgcaaagaagattacagtgttggtgaaaatgtgaggcagctcccatgcaat
cacatgttccacaatgattgcatagtcccctggctggaacagcatgacacttgtccagtg
tgcaggaaaagcttgagtgggcagaacacagcaacaaaccctccagaactatcagggatg
aactttacctcctcttcctcctcctcatcctcttcttcttcctctacccctcagtcctca
agttcgaccagcaacgagaactccaccgataactcatag
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