Siniperca chuatsi (mandarin fish): 122878193
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Entry
122878193 CDS
T08948
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122878193 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122878193 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
schu04131
]
122878193 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
schu03029
]
122878193 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122878193 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122878193 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
122878193 (si:dkey-110c1.10)
Membrane trafficking [BR:
schu04131
]
Others
Actin-binding proteins
Myosins
122878193 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122878193 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122878193 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
Myosin_N
AAA_16
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
122878193
NCBI-ProteinID:
XP_044056593
LinkDB
All DBs
Position
LG6:20435911..20453744
Genome browser
AA seq
1655 aa
AA seq
DB search
MASLELYSKGASVWIPDPDAVWVPALLLQDYSPGEKHLLLQLSNGKEVHYPVVSPSDLPP
LGNPNILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIVAANMRT
YLLEKSRVVFQASAERNYHIFYQLCASRELPEMRSFKLDAPEHFHYTSQGGEVQIPGTDD
LLDLERTRNAFTILGVQPDQQMELFRILSAVLHLGNVNIQASGRSSGRCYINADDRSLTV
FSKLLGVEGPQMAHWLCHRRLTVGGEMLVKPMSGQQAVEARDALAKHIYGQLFTWTVQRL
NSALRTQRGQAKSFIGVLDIYGFETFDQNSFEQFCINYANEKLQQQFNRHVFHLEQEEYV
REELAWSRIEFSDNQQCINLIEGQLGLFDLLDEECRMPKGSDESWVRKLYDQHLTSKPHP
HFRKPRMSNSAFIVVHFADMVQYECDGFLDKNRDTVFEELINILKASQSELVAELFQQQG
HVSSVANGGVRSGKRAPREHKLTVGFQFRQSLQMLMDILNSTTPHYVRCIKPNDLKEPFM
FDPRRTVQQLRACGVLETIRISAAGYPSRWTYQEFFSRYRLLLRGPQSQEQAQASCRQAL
PQLIPDPDQYCFGKTKVFFRAGQVALLERLRAERLRVAAVIIQSRVRGWLARIRYSRISW
ATVTIQRYCRGALARRLALTLRYTMAALVIQKTYRMVVVRQLFLMIRKATITIQAFTRGT
LARRRYRLLVAERAAVLLQARVRGWLARQAYRRVRAAVVFMQCCVRRRAARRELLKLKTE
ARSVERYRELNKGMEVKLMQLQLRADQEARESAALRETLHAERETTSAELEALRATIQKL
ESQKHEKPPPCPVISEKEVEERRRAEEKAVQEILQLTQELQALQREKDSFCKERDALSAR
LLQQEKTQEECVHQAVSQASAALRAELDEERRKYQGLLREFTRLEQRYDNLREMSLLTEG
HRRTDSTHSLSLEPPSPTLLSPQSLTPLSLSPFQSAFTSPEEVRRVSVTSPTLERRVSVW
SSETPMDKLMERMDVAKDPAVKMKGEDLAHAYDAVRVANKFLESQLRGQHSQWEGELEAL
RCQLSQAISSSSSAAQRQELLEAREQECVRLRRELKELKNTVSLRRLLTQVLPSAFTPET
YSCPSQPKQATVTGLLECRKRDETKLIKNLITDIRVDSALSLPPGLPASVLFLCVRQADC
SGAQTHARSLCSAAVTAMKAALKKHRNDVDMTALWLKNACLLHDLLTQHSPKQTLDSDEL
VPLTTDLSDLIHALSDLCIQAYQQLLSITETRLQNIIVPALLESETIPGLSGSVVKLGTS
RKRAGSEPGTVGGGAPTMASVLRELGALHTALSHQALPPTQMEQAFHQLTYLIAASALNS
LLLRKDMCCWSRGMQIRYNVSLLEEWLRSRGLQAGGAVATLEPLIQAVQLLQAGKKTEAD
AQALVQTCTALSSKQIVKILTLYTPHSDLDERVTLNFIRTVQGLLKGRSDGQPPQLLMDV
RRVFPVTFPYLPPPVLHVEQLVIPDSLKISFLRKA
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactggagttatacagcaagggagcaagtgtgtggatacctgacccggatgca
gtttgggtgccagccctactcctccaggactacagtcctggagagaaacatctactgcta
cagctctctaatggaaaggaggtccattacccagtggtgtccccatcagatctcccaccg
ctggggaaccccaacatcctagagggggaaaatgatctaacagctcttagcttccttcat
gaacctgctgtcttgcacaacctccgggttcgattcctggactacagcagcatctacaca
tactgtggcattgtgttagtggccatcaatccctatgaccagctccccatatatggagag
gaggtgatagatgcttacagtggtcaggacatggccgacatggaacctcacatcttttct
gtggctgaggaagcctaccgcaccatgaccagggaggagaaaaaccagtctatcatcatc
agtggagagtctggctcggggaaaacggtctcagctaaattcaccatgcgttactttgct
gtggttggaggagcagcacagcagaccagcgtggaggagagggttctggcttccaaccct
atcatggagtctattgggaatgctaaaaccactcgaaatgacaacagtagtcgttttggg
aagtacatcgagatcggctttggcagaaaaggggacatcgttgcagcaaacatgaggaca
tatttactggagaagtcaagggttgtcttccaagcatcagcagagaggaactaccatatc
ttctaccagctgtgtgcctccagagagttgcctgaaatgagatcatttaaactggacgca
cctgaacatttccactacaccagccagggaggagaggtacagattcccggaactgatgat
ttgttggacctggagcgcactcgcaatgctttcaccattctgggtgtgcagcctgaccaa
cagatggagctcttcaggatcctgtcagctgttctgcacctgggaaatgtcaacatccaa
gccagtgggagaagttctggcaggtgttatattaatgcagatgaccgctcactgactgtc
ttctccaagctgttaggagtggaaggacctcagatggcccactggctgtgtcatcgcaga
ctgactgtagggggagagatgctggtcaaaccaatgtccggtcagcaggctgtagaagcc
agagatgcactggctaaacatatctatggccagctgtttacatggaccgtccagaggctc
aactctgctctgcgcactcagaggggacaagccaaatcctttataggggtgctagacatc
tatgggttcgagacctttgaccagaacagttttgagcagttctgtataaattatgcgaat
gaaaaactgcaacagcaattcaacaggcatgtgttccacttggagcaggaggagtatgtc
cgggaagagctggcctggagcaggattgagttcagcgacaatcagcagtgcatcaatctc
atagagggacaactgggcctgtttgatcttttagatgaggagtgcaggatgcccaaaggt
tcagatgagagctgggtgcggaagctgtatgaccaacacctgaccagcaagccccaccct
cacttccggaaacctcgcatgtccaacagcgccttcatcgttgtgcactttgctgacatg
gtgcaatatgaatgtgatggctttttagacaagaatcgagatacagtctttgaggagctc
attaacattctcaaagcaagtcagtctgagctggtggctgagttgttccagcagcaagga
catgtgtcctctgtggctaatggaggtgttcgctcagggaaaagagcccccagagagcat
aaactgacagtgggcttccagttccgtcagtccttacagatgctaatggacattctcaat
agcaccactcctcactatgtccgctgtattaaacccaacgatctcaaagaaccttttatg
ttcgaccccaggaggacagtccagcagttgagagcctgtggggtgctggagactatacgc
atcagtgccgcaggttatccatccagatggacataccaggagttcttcagcaggtaccgt
cttctgcttcgaggtcctcagagccaggagcaggcccaggcttcatgcagacaggccctg
cctcagctcatcccagacccagaccagtactgctttggaaagaccaaagtattcttccgg
gccggtcaggtggctcttctggagaggctgagagctgagaggctgcgtgttgctgctgtg
atcatccagagccgggtcagaggatggctggcacggattagatactccaggatcagctgg
gcaactgtcaccatacagagatactgcagaggagcgctggccagacgactggccctgacc
ctgcgctacaccatggctgctttagtaatccagaagacctaccgcatggtggtggtcaga
cagttgttcctcatgatccgaaaggccaccatcaccatccaggccttcaccaggggcaca
ctggcgcggcgcagatacagactgttggtggcggagcgggctgctgtgttgcttcaggca
agagtgcgtgggtggttggcgaggcaggcgtacaggcgggtacgtgcggcagtggtgttc
atgcagtgctgcgtgcgccgcagggctgccaggagagagctgctgaaactaaagaccgag
gcccgctcagtggagaggtacagggagctcaacaagggcatggaagtcaaactgatgcag
ctgcagttgagagcagaccaggaggccagggagagtgcagctttgagagagaccctgcat
gcagagcgagagaccaccagtgctgagctggaagccttgcgggcgacgatacagaaacta
gagagccagaaacacgagaagcctccgccctgccctgtcatcagcgagaaggaggtggag
gaaagaaggagagctgaggagaaggctgtccaggaaatccttcaactcacacaagagttg
caagccctgcagagagagaaggacagtttttgcaaagagagagatgctctctctgctcgt
ttacttcaacaagaaaaaacacaagaagagtgtgtgcaccaggctgtgtctcaagcgagt
gcagctctgagggcagagctggatgaggagaggaggaagtatcagggtctcctgagagag
ttcaccagactggagcagagatacgacaacctcagagagatgagtctgctcactgagggc
cacagaaggacggactccacccatagtttgagcttggagcctccctcccccactctgctg
tcaccccagtctctcaccccactctccctgtcacccttccaatctgccttcacttccccg
gaggaggtccgcagggtcagcgtgacatcccccaccctggagaggagagtgtcagtgtgg
agctccgaaacgccaatggacaagttgatggagaggatggacgtggccaaagacccggca
gtgaagatgaaaggagaggacctggcgcatgcttacgatgctgtacgagtggccaacaag
tttctggagagccagctgcgtggccagcacagtcagtgggagggggagctggaggctctg
aggtgccagcttagtcaagcgatctctagttcttcctctgctgcacagcgacaggaacta
ctagaggccagagagcaagagtgtgtcagactgaggagagagttgaaggaacttaaaaac
acagtctcactcagacgactcctgacacaagttctcccatcggctttcaccccagagacc
tactcctgtccatcccaaccgaagcaagcaacagtcactggtttgctggaatgtaggaag
agagatgaaaccaagctcatcaagaacctcatcacagacatccgtgttgacagtgccctg
tctctgcctcctggtctccctgccagcgtgctcttcctgtgtgttcgtcaggccgactgc
agcggagcccagactcacgctcgctcactctgtagcgctgctgtcacggctatgaaggca
gctctgaagaaacatagaaacgatgtagatatgacagctctgtggctgaaaaacgcctgt
ctgttgcatgacctattgacccagcactccccaaaacagacccttgactcagacgaactg
gttccactgaccactgatctgagtgacttgatccatgccctgagtgacctctgtatccag
gcctatcagcagctcctctccatcactgaaacacgtctacaaaacatcatagtccctgct
ctgctggagagcgagaccatcccaggtctgtctggctctgtggtaaagttgggaacgtcc
agaaaacgggcaggctcagaacccgggactgtaggaggcggtgctcccactatggcgtcg
gtgctgagggagctgggagcccttcacactgcgttgtcccatcaggctctgcccccaaca
cagatggagcaggccttccaccagctcacctacctcatcgctgcttccgctctcaacagc
ctgctgctgaggaaagacatgtgctgctggagtcgtggcatgcaaatacgatataatgtg
agtctgctggaggagtggctgcggagccgaggtctgcaggcagggggcgctgtggccaca
ctggagcccctcatccaggcagttcaactgctgcaggctggaaaaaagacagaggcggat
gcacaggcccttgttcagacttgtactgccctgtccagcaagcagatagtgaagattctg
actctctacactcctcacagtgaccttgatgaaagagtcacactgaatttcatccgcact
gtacaggggcttctcaaaggccgttctgacggtcagcctccacagctcctaatggatgtg
aggcgagtgtttcctgtcacatttccctacttgcctccccccgtcctccatgttgagcag
ttagtcatcccagactccctcaagatctcctttctacgcaaagcctga
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integrated database retrieval system
