Siniperca chuatsi (mandarin fish): 122878196
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Entry
122878196 CDS
T08948
Symbol
mbd3b
Name
(RefSeq) methyl-CpG-binding domain protein 3b isoform X1
KO
K11591
methyl-CpG-binding domain protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122878196 (mbd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122878196 (mbd3b)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
122878196 (mbd3b)
Chromatin remodeling factors
NuRD complex
122878196 (mbd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD_C
MBDa
MBD
DUF7028
Clr2_transil
Pardaxin
Motif
Other DBs
NCBI-GeneID:
122878196
NCBI-ProteinID:
XP_044056613
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Position
LG6:20428410..20435743
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AA seq
274 aa
AA seq
DB search
MEKKRWDCTALPKGWKMEEVTRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNQMDLS
SFDFRTGKMLMSKLNKNRQRLRYDNNNQNKGKPDLNTSLPVRQTASIFKQPVTKVTNHPN
NKVKTDPQKAVDQPRQLFWEKKLSGLNAYDIAEELVKTMELPKGLQGVGPGCTDKTLLSA
IASALHTSAAPITGQLSAAVEKNPGVWLNTAQPLCKAFIVTDEDIRKQEELVYSVRKRLE
EALMADMLAHVEEAANEGEALKEEGNSSEDMESV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaaggtgggattgcactgctctccccaagggctggaaaatggaagaagtg
accagaaagtcgggtttgtcagctggaaaaagcgatgtctattattttagtccatctggg
aagaagtttcggagcaagcctcagctggcccgttaccttggcaaccagatggacctcagc
tcttttgatttccggacggggaagatgctgatgagcaagctgaacaagaaccgccagaga
ctgcgctatgataacaacaaccagaacaagggcaaacctgatttgaacacatcactccca
gtcagacagacggcctccatctttaagcagcctgttaccaaggttaccaaccacccaaac
aacaaagtgaagacggatcctcagaaagccgtcgaccagcccagacagctattttgggag
aagaaactcagtggtcttaatgcttatgacattgcagaggagctggtgaaaacaatggaa
ctgcctaaaggcctgcaaggtgttggtccaggctgcacagacaagactctcctgtcggct
attgctagcgctctgcacaccagtgctgctcccatcactggccagctgtctgcggctgtg
gagaagaacccgggagtttggctcaacaccgcacagccgctgtgcaaggccttcatagtc
acagatgaggacatcaggaaacaggaggagctggtgtacagtgtgaggaaaaggctggag
gaggcactgatggctgatatgttggcccacgtggaggaggctgccaatgaaggagaggct
ctgaaggaggagggcaacagcagtgaggatatggagagcgtataa
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