Siniperca chuatsi (mandarin fish): 122878264
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Entry
122878264 CDS
T08948
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122878264 (si:dkey-183n20.15)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122878264 (si:dkey-183n20.15)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122878264 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
zf-RING_2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
122878264
NCBI-ProteinID:
XP_044056777
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All DBs
Position
LG6:22086884..22095036
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AA seq
266 aa
AA seq
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MSAAVSRSTMHPHHSSQSKLDHLPSEGAAGHGHLGSSRSLVCTPDQSASTYISCHKESTQ
SCPSTSRDWHCPVCLQTASFPVQTNCGHLFCAPCLIAYWRHGAWLDAISCPLCRQKVIVL
CNLFNESRSDRQSKEVLGKITDYNKRYSGAPRRLTDYLCDAPLLLQLLARGLGTMGGLVW
LFFFRVALCCVGTVVSISSPPLDSVSSSANPLETDPSLCGLLGVLDDLVVVILLLICVIN
INQQMAPERGHYANATTSQGVTGSSL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgctgtttctagatcaactatgcacccccaccacagctctcagtccaaactg
gaccatctcccctctgaaggtgcagcgggtcacggtcacctcgggtcatccagatctctg
gtgtgcacacctgatcagtcagcatcaacgtacatcagttgccacaaggaatctacacag
tcatgtccatcaacaagccgagactggcactgtccagtctgcctgcagacggccagcttc
ccagtccagacgaactgtggccatttgttctgtgctccctgtctgatcgcctactggaga
catggggcctggttggatgcaatcagctgccctctctgcagacagaaggtgatcgtgctg
tgtaatctatttaacgagagtcgatcggaccgtcagtcaaaggaagttcttgggaaaatc
acagactacaacaaacgttattctggagccccgcgaaggttaacagactacctgtgtgac
gcgcccctcctcctgcagttactggcccgaggcctaggcaccatgggaggactcgtgtgg
ctgtttttcttcagggtggccctgtgctgcgtggggaccgtggtgtccatctcctcccct
cctctggactccgtctcctcatcagcaaaccccctggaaacagacccctccctctgtgga
ctgctgggggtcctggatgacctggtggttgtcatcctgctccttatctgtgttatcaac
atcaaccagcaaatggcgccagagagaggacactatgcaaatgctacaacctcccaagga
gtaacggggagttcactgtag
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