Siniperca chuatsi (mandarin fish): 122878299
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Entry
122878299 CDS
T08948
Symbol
med16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122878299 (med16)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
122878299 (med16)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR35_TULP_N
WD40_Prp19
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
122878299
NCBI-ProteinID:
XP_044056881
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Position
LG6:235452..248397
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AA seq
835 aa
AA seq
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MELAYVCEWEKRPKSTHCPSIPLVCSWSCRNLVAFTTDLKNEDDDKDVSHMIHIIDTEHP
WDVYSINSGHTEVISCLEWDQSGSRLLSADGDGQIKCWSMSDHLVNSWESVLSSSLDGDP
IVALSWLHNGVKLALHVEMSGSTNFGEKFSRVKFSPSLTLFGGKPMEGWLAVTVSGLVTV
SLLKPGGALLTASESLCRLRGRVALADIAFTGGGNIVVAATDGSSSSPVQFYKVVVSVVS
EKCRIDTELLPSLFLRCTTDAQRRERYPAVTHLKFLTRENSEQVLLCASTQNGSIVECWS
LRKEGLPVNNIFQHRSPVVGEKQPTILKWRILTTTGDLERVSAVALPKLPISISNTDLKV
ASDTKFCPGLGLALAFHDGSIHILHRLSLHTMGVFYGASSSSSGQRPGDESAIKRQRTGG
PALHFKALQFSWTSLALAGVDNHGKLHMLRVSPSMGQVLEMNTTLRHLLFLLEYCMVTGY
DWWDVLLHVQPTMVHNLVEKLHEEYMRQNQALQQVLATRIVAVKASLCKLSTATAARACD
FHAKLLLIAISSTLKSLLRPHVLNTPDKSPGDRLTEICAKNTDTDIDKVMINLKTEEFVL
DGPPLQSLQQLIQWVGDFVLYLLANLPNQGSMVRPGFGFMRDGASLGMLREMLVMIRIWG
LLKPGCLPTFTATSDNQDSMQLLFRLLTKLWLCSRDDGPPQDPDESLIDECCLLPSQLLV
PSMDWLPVNDGVIVKLQGKHPLRLQFGKASSLPGVGSTAPLEVFTRSPGSQKMDNLRCVH
MGVCPTEESKACTRCGCVTMLRSPNKTNAMKQWEQRWIKNCLCGGLWRRIPPTLS
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggagttggcgtacgtgtgtgagtgggaaaaacgtccaaagagtactcactgtccctcc
atccctctggtctgctcctggtcctgcaggaacctggtggccttcaccacagacctgaag
aacgaggacgacgacaaagatgtcagtcacatgatccacatcatcgacactgagcacccc
tgggatgtttactccatcaactctggacacactgaggtcatttcctgtctggagtgggac
caatcaggttcgaggctgctgtctgcagacggtgacggtcagattaagtgctggtcgatg
tcggatcacctggtgaacagctgggagagcgtcctttccagctctctggacggagatccc
atcgtagctctgagctggctgcacaacggggtcaagctggccctgcacgtggagatgtcg
ggttctacaaacttcggagagaagttttctcgggtgaagttctctccgtctctgactctg
ttcggcgggaagccgatggagggctggttggcggtgacggtgagcggtttggtcaccgtg
tcgctgttgaagccgggcggcgctctgctgacggccagcgagagtctctgccggctcaga
ggacgagtggcgttagccgacatcgccttcaccggaggagggaacatcgtggtggcagcg
accgacggcagcagctcgtcccccgtccagttctacaaggtggtcgtgagcgtggtgagc
gagaagtgtcgcatcgacaccgaactgttgccgtcgctgttcctgcgctgcaccaccgac
gctcagaggagggaaaggtacccggctgtcacccacctcaagttcctcaccagggagaac
tctgaacaggttctgctgtgtgcgtccactcagaacggcagcatcgtggagtgctggtct
ctcaggaaggagggacttcctgtcaacaacatcttccagcatcgatcaccagttgtcggg
gagaagcagccgaccatcctgaagtggaggatcctgacgaccaccggcgatctggagcgc
gtgtcggccgtcgctctgcccaaactgcccatctccatctccaacaccgacctgaaggtg
gcgtcagacaccaagttctgccccggactcggtctggctctggcgttccacgacggcagt
attcacatcctgcaccgtctctccctccacactatgggggttttctacggcgcctcgtcc
tcctcttcaggtcagagacccggagacgagtccgccatcaaacgccagagaaccggaggc
cccgccctccacttcaaggccctgcagttctcctggacctcactggcactggctggagtc
gacaaccacggcaagctccacatgctgcgagtgtcgccctctatgggtcaggtgctggag
atgaacacgacactgcgccacctgctgttcctgctggagtactgcatggtgacgggctac
gactggtgggacgtcctgctacacgtgcagcccaccatggtccacaacctggtggagaag
ctgcacgaggagtatatgaggcagaaccaggcgctgcagcaggttctggcgacgcgcatc
gtggcggtgaaggcttctctctgtaaactctccacggcgacggcggctcgagcctgcgac
ttccacgccaaactgctgctgatcgccatcagctccaccttaaagtctctgctgaggccg
cacgtcctcaacacacctgacaagagtccaggtgaccgactgaccgagatctgtgccaag
aacacagacacagatattgataaggtgatgatcaatctgaagacggaggagttcgtgttg
gacggccccccccttcagtccctgcagcagctcatccagtgggtgggagactttgtgctc
tacctgctggccaacctgcccaaccagggctccatggtccggccggggttcggcttcatg
agggacggggcgtctctggggatgctgagggagatgttggtgatgatcaggatctggggt
ctgctgaagcccggctgtctgcccaccttcaccgccacgtcagacaaccaggacagcatg
cagctgctgttcaggctgctcaccaagctgtggctctgctctcgggacgacggccccccc
caggaccctgacgagagtctgatagacgagtgctgcctgctgcccagtcagctgctggtt
cccagtatggactggctcccagttaatgacggcgtcattgtcaagctgcagggcaaacac
ccgctcaggctgcagtttggaaaagcttcgtctctgcccggagtgggctccaccgccccg
ctggaggtcttcaccaggagtcccggctctcagaagatggataacctgcgttgtgttcat
atgggagtttgtcccactgaggagagcaaggcctgcaccaggtgcggctgtgtgacgatg
cttcgttctcccaacaagacaaacgccatgaagcagtgggagcagcgctggatcaaaaac
tgtctgtgtggaggtctgtggaggaggatccctccaactctctcctga
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