Siniperca chuatsi (mandarin fish): 122878324
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Entry
122878324 CDS
T08948
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122878324 (syde2)
Membrane trafficking [BR:
schu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
122878324 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
122878324
NCBI-ProteinID:
XP_044056945
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All DBs
Position
LG6:complement(7239957..7288739)
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AA seq
1724 aa
AA seq
DB search
MADPLRRTLLAKLRGKKSKKGATVGGGYGSAAAANGGREGKEKVMQTQRDSDGARPVVLL
TGLDCTTERMSTYENCVDWAMVQTAGVVIVRESRAAELAGARPQERSSGGRVRVNEDLLG
VSLQRDVQFGGHGVREGDTSHQGPRSAGKITLSAGVTLGGPHVQRRHFSISVPRQCSVGD
SIGFGDSSNHVLHRARVEPHTGDGKQPEGRVTAHDSDGTEPRDRGHSRHMAGTVEAVDEH
NANWSFDNHNNHNLETSSTVCAALVYPNGTSRNTEENILIRNVESYGPEYAGDIRGTAGC
LQSPTFFPTELEICDINMASLCATEGSLRYTLDSEDEDYYDNEILPFYETIRAKSDGDRA
EVAELPQPGQDKGQLDDSAQETDRLRNQLKEAYYLLINAMNDINLDVQQISSGSTEQQTT
SSCSSHSRDSLCSRLSAKNIDSDSWSSGADHSPQQVSDTDSLLLCLSGNLESDLKGRLNS
KSMVNLSLTKIRPTLLRSASDGAIRFPGGPSLCIQATGDKGATETKEAEGGKVTGVGELS
HPGVLFDAISSDELLQDAGGDEDRGGQLNESSGSVNSLTGSSDSNADASTHQGLDNKREL
TEARAQGANSVNKGHGVTVNKMQEWMHKGRLLSSEMKQRIEGSSLPRGGCQSQDRSCPQA
NLGVRKLGVQTSSRGVKSVKVTKSSAIKSPRQQQPAFIENVPTPCANGREVGRANESWRP
PLTTITVSKKRNWLQQSSLGKNHCTKDELQGMLGAEEEGSQGSHQPPPPPSPSPDHLRPT
GGVPSRPVRLHLPQVIVGQAKVSPHPRSVDPAEENDADDEGEIWYNPIPEDEEPEMSHRP
SVRLLVPLRAEAQRRPIRGGDLGHGGRNLGGGSHAAPEAIGESLGGGGGSGDGSQGNAVH
STEALHLHRQMLACKPQEEGGPSTNRATDGPDLPNAVSSPPSSPNPAKKSSSINWSFPDK
IKSPRTVRKISMKMKKLPELSRKLSVKGTPSSSNSNNGNGSSQLEPRAHSPRNNGSGSEA
VPHSPGPPRLAASGGGQASRNVISRYHLDSSVSTQHSFSKKKSNGSSKSASKGGYLSDGD
SPELVAKSGKHGSAEGKGGKGKEVEGGGGSSKLNGTELDIDAFRHYSFTEQPKCSQYISG
LMSLHFYGAEDLKPPRVDSRDVYCAIQVDSVNKARTALLTCRTTFLDMDHTFNIELENAQ
HLKLVVFSWEPTPRRNRVCCHGTVVLPALFRVTRCHQLAVKLEPRGLIYVKLSLMEQWQN
SLDGGPDGDREPQVFGVEAWRVVERESTGLMVPLLISKCINEIEKRGCQVVGLYRLCGSA
AVKKELREAFERDSYAVDLCENTYPDVNVITGVLKDYLRELPYPLITKHLYEAVLETMVT
RPLRMGAAGCENDQADSEHTVSLLDNLPEVERMTLRRLLDHLKLVASYQEVNKMTCQNLA
VCFGPVLLSQRQEASCHTNRVFIDSEELASALHFKKHIEVLHYLLQLWPVVDPYGQSSSQ
PPAASLAPASSDLLSVPPLRRRKERPQVLNLTEAEMAGVLRPKPGRLDSPSNRYAGDWSG
CGESYFPCEILLPPSKEEADYDDVPAEDTDAAEEGQGKPEDAEEDEGHKVTSPASDPAEL
EQPQREEVVKEEEKEEEDEENQVESDSSGNGQPLEDKEEEERVCDHILAPRLPKEHTYQA
YMKIQDISPVLSNRVNLRDLQESIDTLIGNLERELNKNKLNVGY
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactttactagcgaaactccgggggaagaaatccaagaaa
ggagcgacggtcggcggtggatacggctctgctgctgcggcgaatgggggccgagaaggt
aaagaaaaagttatgcaaacgcagcgagactccgacggggctcgcccggtagtgttgctc
acagggctggattgcacgacagagagaatgagtacgtacgagaattgtgtcgattgggcg
atggtgcaaactgcgggggttgtaatagtccgtgagagtcgcgcagctgagttggccggc
gcacgtccccaggagcggagcagcgggggcagggttcgggttaatgaggacctcctgggg
gtctcacttcaaagagatgtgcagtttgggggacatggggtaagggagggagatacgagc
caccaggggcccagatccgctggcaaaatcacgttatcggcgggggtcacgcttggagga
ccgcatgtccagagaagacacttctcgatctcggtcccgcggcagtgcagcgtcggggat
tcaatcgggtttggggacagttcaaatcacgttttgcaccgagcacgggtagaaccgcat
accggggacggtaaacaaccagagggccgggttaccgctcatgatagtgatgggacagag
cccagagacagaggacactcccggcacatggcagggactgtagaggctgttgatgaacac
aacgccaactggagttttgacaaccacaacaaccacaatttggagacgagctcgacagtt
tgcgcagcgcttgtgtatccaaacggtacgtcaagaaacacggaagaaaacattttaatc
agaaatgttgagagttatgggcctgagtatgcaggggacattagagggactgcaggctgt
ctgcagagcccgacgtttttccccacagagttagaaatatgcgacattaacatggcatcc
ctttgcgccacagaggggtcacttaggtacactttagatagtgaagatgaggattattat
gataatgaaattctgcctttttatgaaactattcgagcaaaaagtgatggtgatagagca
gaggttgcagagctgccacagcctggtcaggataaaggacagcttgatgacagtgcccag
gaaacagacaggcttaggaaccagctgaaagaagcttattaccttcttatcaatgctatg
aatgatatcaacctggatgtccaacagattagtagtggttcaactgagcagcagaccacc
tcctcctgtagtagccactccagggacagcctgtgctcgaggttgtctgccaaaaacata
gacagtgactcctggtcctcaggggccgaccacagccctcagcaggtgtctgacactgac
tcactcctgctttgcctcagtgggaaccttgagtcagacctcaaaggcaggttgaatagt
aagagtatggtgaacctgtccttgaccaagataagacccacattactacgctctgctagt
gacggagctatccggtttccaggtggaccctcgctctgtattcaggccactggtgataag
ggggccacagagacaaaagaggctgaagggggtaaagtcacaggagtgggtgagctgtca
catcctggggtgctttttgatgccatcagcagtgatgagctgctacaagacgctggcggt
gatgaagaccgtggcgggcagctcaatgagagcagcggctcagtcaacagcctcacaggt
tcttcagacagcaatgccgatgcatcaacacatcagggtctcgacaacaagcgggagctg
actgaagcccgcgcacagggtgccaactctgtcaacaaggggcatggtgtcactgtcaac
aagatgcaagagtggatgcacaaggggcgtctgttgtcttctgagatgaagcagcggatt
gagggctcatctttgccccgtggtgggtgccaaagccaggaccggtcctgtcctcaggct
aaccttggtgtgcgtaaactaggggtccagacctccagccgaggggttaaatctgtcaag
gtcaccaagtcatctgcaatcaagtcaccacggcagcagcagccagctttcattgagaat
gttccaaccccctgtgctaatggccgtgaggtgggcagagccaatgagtcatggcggcca
ccgctcaccaccatcactgtctccaagaagcgcaactggctacagcaaagctcccttggg
aagaatcactgcaccaaggatgaactgcagggaatgctgggagctgaggaggagggcagc
cagggctcccatcagccgccacctcctcccagtccctctccagaccacctgagacccaca
gggggagttccatcacggccagtccgcctgcacctgcctcaggttatcgtcggtcaggcc
aaggtgtctcctcaccctcggagcgtggacccagccgaggagaatgacgctgatgatgaa
ggagagatctggtacaacccaatccctgaggatgaggaaccggagatgtctcatagaccc
tccgttcggctgctggttccccttcgagcagaggcccagaggaggcccatcaggggaggg
gatttgggtcatggtggcaggaacctggggggtggcagccacgccgcgccggaggcgatc
ggggaaagccttggtggcggtggcggttcaggagatgggagtcaggggaatgctgtacat
tccacagaggcactacatctgcacagacagatgctcgcgtgcaaacctcaggaggaggga
gggccttccaccaacagagccacagatggtcctgacctgcccaatgccgtcagctcccct
ccctccagcccaaacccggccaagaagagcagctccatcaattggtcctttccagacaag
attaaatccccgcgcactgtaaggaagatctctatgaagatgaagaagcttccggagctt
agccggaagctcagcgtcaaggggactccgagtagcagtaacagcaacaacggcaacgga
agcagtcagttagagcccagagcccattctccccgaaacaacgggagtgggtcagaggct
gtcccccattccccaggccctcccagattagctgcatctgggggtgggcaggccagccgt
aacgtgatctcacgctaccacctggacagcagcgtgtccacacagcacagcttcagcaag
aagaaaagtaacggcagctcgaagtccgccagtaaaggtggctacctcagtgatggtgac
tcacctgagctggtggccaaatctgggaagcacggctctgcagaggggaagggaggaaaa
ggcaaggaggtagaaggaggaggtggaagctccaaactcaatggcacggagctggacatt
gatgctttccgccattacagcttcacagagcagcccaagtgcagccagtacatctccgga
ctgatgagcctgcacttttatggtgctgaggacctcaaacctccacgcgttgactctcga
gacgtatattgcgccatccaagtggactcagttaataaagcacgaaccgctctcctcaca
tgccgaactaccttcctagatatggaccacaccttcaacattgagctggagaacgcccag
cacctgaagctggtggtgttcagctgggagccgacgccgagacgcaaccgtgtctgctgc
cacggtacggtggttctgcctgcgctcttccgggtgacgcggtgccaccagctggcggtg
aagctggagcctcgggggttgatctacgtcaagctgagcctgatggagcagtggcagaac
tcgctggatggtgggccagatggagacagggagccccaggtgtttggtgtggaggcgtgg
cgggttgtggagagggagagcacgggactgatggtgccgctgcttataagcaagtgcatc
aatgagatcgaaaagagaggctgccaggtggtgggtctctaccgtctgtgtggatccgca
gctgtaaagaaggagctacgtgaggcgtttgagagagacagctacgccgtggatctgtgt
gaaaacacgtatcccgacgttaacgtcatcacaggagtactgaaggactacctgcgagag
ctgccctaccctttgatcactaagcacctgtatgaggcagtgttggagaccatggtcacg
aggcctctgcggatgggagcagcgggctgcgagaacgaccaggccgactcggagcacacc
gtcagtctgctggacaacctgccagaggtggagaggatgacactgcggaggcttcttgac
cacctaaagttggtagcgtcctatcaggaagtgaacaagatgacgtgtcagaacctggcg
gtgtgtttcggcccggtgctactcagccagcgccaggaggcatcctgccacaccaaccga
gtcttcatcgactccgaggagctggccagtgcgctccacttcaaaaaacacatcgaagtc
ctgcactacctgctgcagctctggccagttgtggacccatatggacagtcctcctcccag
ccccctgcagcttctttggctccggcctcatctgacctgctgtcagttcctccattacgg
cggagaaaagagcgcccccaggtcctgaacctcacagaagcggagatggcgggtgttctg
cggcccaaacctgggcgcctggacagccccagcaaccgctacgcaggcgactggagcggc
tgtggcgagagctacttcccttgtgaaattctgctgcctcccagcaaagaggaggcggac
tatgatgacgtgcccgccgaggatacagacgcagctgaggaggggcaggggaagcctgag
gatgcagaggaagatgaagggcacaaggtcacaagccctgcgtctgatcctgctgagctg
gagcaacctcagagagaggaggtggtgaaggaggaggaaaaggaggaagaggacgaggag
aatcaagtagagagtgatagttcaggcaatgggcagccattagaggacaaggaggaggag
gagagggtgtgcgaccacatcctggcccctcgtctgcccaaagagcacacctaccaggct
tacatgaagatccaggatatcagccccgtgctgagcaacagagtcaacctgagagacctg
caggagagcatcgacactctgataggaaacctggagagagagctcaacaagaacaagctc
aacgtcggatactga
DBGET
integrated database retrieval system
