Siniperca chuatsi (mandarin fish): 122878354
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Entry
122878354 CDS
T08948
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122878354 (rnf13)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122878354 (rnf13)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122878354 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf-RING_16
zf_RING_Vps8_fungal
Glucos_trans_II
DUF7027
FeoB_associated
zf-RING_4
PHDvar_NSD
RINGv
PHD
zf-RING-like
Neur_chan_memb
Hemotin
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
122878354
NCBI-ProteinID:
XP_044057006
LinkDB
All DBs
Position
LG6:complement(13837114..13890015)
Genome browser
AA seq
380 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADIAAYSFDNKTENFDDLPARFGYRLP
SDGLKGFLIGARPENACQPIEPPPRDNLTGAFIVLIKRFDCNFDIKVLNAQKAGYKAAIV
HNVDSDDLISMGSNDLDVMKQIDIPSVFVSEETANSLKEDYTYDKGGHVVLMPDFSLPLE
YYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKYKKGDNYDVCA
ICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSEDGESSV
EENEDVSESTPLLRSLASTSAHSFGTMSGASRSEHDQESSEYEDDELDSSDSEEEVTVET
VVVQMQQPCSEGPEHDLPRV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtccctgggaatgctgatgctgtcggccacgcagatttataccatcttcact
gttcagctcttcgccttcctcaacctgctgcctgtggaggccgacatcgccgcttactca
tttgacaacaaaacagagaactttgatgacctgccagcaagatttggctatcggctaccc
agcgacggactgaagggcttcctgattggggcgcgaccagaaaatgcgtgccagcccatc
gagccccctccgagggacaacttgacgggcgccttcatcgtcctcatcaagcgcttcgac
tgcaactttgacatcaaggtcctcaatgctcagaaagccgggtacaaggcagccattgtt
cacaatgtggactctgatgacttaatcagcatgggatccaatgatttggatgttatgaag
cagatagatattccctctgtgtttgtgagtgaggagactgccaactctctgaaagaagac
tacacgtatgacaaggggggacatgtggtcctcatgccagacttcagcctgccgctcgaa
tactacctgatccccttcctcatcattgtgggaatctgcctcatcctcattgttgttttc
atgatcaccaagtttgtccaggatcgtcacagggctcggaggagccgcctgcgcaaagat
caactaaagaaacttcccatccacaagtacaagaaaggggacaactatgatgtatgtgcc
atctgcctggacgaatatgaagaaggtgacaaactcagagtcctgccatgttctcatgcc
taccacagtaagtgtgtggacccctggctgaccaaaactaagaagacgtgtccggtgtgc
aagcagaaagtggtcccctcgcagggtgactctgattcagaggatggagagagcagcgtt
gaagagaacgaggacgtgtcggagagcaccccgctgctgcgctctctggcctccaccagc
gcccactccttcggcaccatgtcgggagcatcgcgctcagagcatgaccaggagtcttcc
gagtacgaagacgacgagctggacagcagcgacagcgaggaagaggtcaccgtggagact
gtggtggtgcagatgcagcagccctgctctgaaggccccgagcacgacctgccccgagtt
tga
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integrated database retrieval system
