Siniperca chuatsi (mandarin fish): 122878403
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Entry
122878403 CDS
T08948
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122878403 (hmg20b)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
122878403 (hmg20b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DUF4763
HMG_WDHD1
DUF2986
Nuc_rec_co-act
Motif
Other DBs
NCBI-GeneID:
122878403
NCBI-ProteinID:
XP_044057127
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All DBs
Position
LG6:complement(20504023..20511895)
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AA seq
333 aa
AA seq
DB search
MWVSSQPIMTLRTDQSYARQGSLPVLPRESYRSIARTEIMGGIKQEQSDASHQPKPSHSA
DQPQDEPKKRGWPKGKKRKKVLPNGPKAPVTGYVRFLNERREHMRARYPDLPFPEITKRL
GAEWTRLAPNDKQRYLAEAEREKMQYAQELKEYQQTEAYQITSAKIQDKRIKKEDTPSVI
ISTSSESSLSKASDLPSRFDIPIFTEEFLDQNKAREAELRRLRKANIEFEEQNAVLQRHI
KDMYNAKERLEAELGLDEKRTQALHQHLLAIKHTLVNSLSSVPLPGTGETASLGNLDSYL
SRLSGVLEGNPHKHRALLSQLCELLSHLDSEKL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtatccagccaaccaatcatgactctccgtaccgaccaatcatatgccagacag
ggttctcttcctgttttgccgagggaatcatatcggtcaattgcacggacggagatcatg
ggagggatcaaacaagaacagagtgatgcatcacatcagcccaaaccttcacattcagca
gatcaaccacaagatgagccaaagaagagaggatggccgaagggaaagaaaagaaagaag
gtattaccaaatggtcccaaggcaccagtaacaggatatgtccgcttcttgaatgaacgc
cgagaacatatgcgggcccgataccctgacttacctttcccagaaatcaccaagagactt
ggagcagagtggacacgattagccccgaatgacaaacagcgctacctggccgaggcggaa
agggagaagatgcagtatgcccaggaactaaaggaatatcagcagactgaggcctatcag
atcaccagtgccaagatacaagacaagaggatcaagaaagaagacactccatctgtcatc
atcagtactagttcagagtcatctttatcaaaggcttctgacctcccaagcagattcgac
atccctatcttcacagaggagttcctcgatcagaacaaagctcgagaggccgagttgcga
cggcttcgtaaggccaacattgagtttgaagagcagaatgcagtgcttcagcggcacatt
aaggacatgtacaacgctaaagagcgcctggaggctgaactggggctggacgagaagcgt
acccaggctcttcaccaacacttgctggccattaaacacacattggtcaacagtctgtca
tcagtccccctgccaggtacaggcgagacagcgtctcttgggaacctggactcatacctg
agtcgtcttagtggagtgctagaaggaaacccccacaaacatcgtgccctgctgtcccag
ctttgcgaattactctctcatctagacagtgagaagctatga
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