Siniperca chuatsi (mandarin fish): 122878449
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Entry
122878449 CDS
T08948
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122878449
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schu02000
]
122878449
Transporters [BR:
schu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122878449
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
122878449
NCBI-ProteinID:
XP_044057176
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Position
LG7:9264812..9276348
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AA seq
585 aa
AA seq
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MLNKKCATKHKQVELEERGHWGSKVEFLLAVAGNVVGLGNVWRFPYLCYKNGGGAFLVPY
LVFVVTCGVPLFLLETTIGQYTKEGGITCWRKLCPLAEGIGYGGQVILFYSCMTYIIILS
WALLYLVFSFSSQLPWASCNNYWNTDDCVDLSTRNNTFEWTNQTDAASAATEFWERRVLA
ISGGIEEIGSIRWEVLLCLIVMWVICYFCIWKGVKSTGKVVYFTATFPYVMLLILLIRGL
SLPGALQGVLFYLLPELSRLTDPQVWMEAGAQIFFSYSVGVGSLTVLGSYNTYNNNCYKD
CLWLCLLNSGTSVVAGFAVFSVLGFMAHKQGVPIAEVAESGPGLAFIAYPQAVAMMPLPQ
LWSICFFVMLILLGLDTQFVAMEVVMTSIIDMFPTEMRRAGRRERFLLLFCAICFFSQLF
MITEGGMYVFQMFDYYACNGACILFLCVFQSLALGWIFGAERLYGIIKDMTGVQANSFFK
ICWLYLTPLVSLGSFICSLVWYQPLTFNRWYVYPAWAYTLGWVLALSSILLVPGWALYKL
GTGTGNLSQRFHHLCRPDPGCSLTQKGETELQHIGGEDRHRLTVI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaaaaatgtgcaacaaaacacaagcaagtggagttggaggagagaggacac
tggggaagtaaggtggagtttctcttggctgtggcgggaaatgttgtcggcctgggcaac
gtgtggaggtttccttacctctgctacaaaaacggagggggtgcattcctggtgccatat
ctggtatttgtggtgacctgcggcgtacccctgttcctgctggagacaaccataggccag
tacaccaaggagggcggcatcacctgctggaggaagctatgcccactggcagaaggtatc
ggctatggtgggcaggtgatcctcttctacagctgtatgacctacatcattattttgtcc
tgggctttgctctacctggtgttctccttcagctcccagctcccctgggccagctgcaac
aactactggaacacagatgactgtgtagacctttcaacacgaaataacacctttgaatgg
accaatcagactgatgcagcctcagctgccaccgaattctgggaacgacgagtgctggct
atctcaggggggattgaggagattggcagcatcaggtgggaggttctgttgtgcctaatt
gttatgtgggtcatctgctacttttgtatctggaaaggggtcaagtctacaggaaaggtg
gtgtatttcactgctaccttcccctacgtgatgttgttaattcttttgatccgtggactc
tctcttcctggggctctacaaggagtgttgttttatcttttgcctgaactctcacgactc
acagaccctcaggtttggatggaggctggggctcagatcttcttctcgtacagtgtgggt
gtgggctccttaactgtgttgggcagctacaacacttacaacaacaactgctataaagac
tgtctgtggctgtgtttactgaacagtggtaccagtgtggtagctgggtttgcagtcttc
tctgtgctgggattcatggcccacaagcagggtgttcccattgcagaagtggccgagtca
ggtccaggcttggcgttcattgcataccctcaggctgtagccatgatgcctctgccccaa
ctgtggtccatctgtttctttgtcatgctcatcctcttgggtttggacacacaatttgtt
gccatggaggtggtgatgacatccatcatagacatgtttcccacagaaatgcgcagggca
ggcaggcgggaacgtttcctactcctcttctgcgccatatgctttttctctcagcttttc
atgatcactgagggagggatgtatgtgttccagatgttcgactactacgcttgtaacgga
gcctgcatcctctttctctgtgtgtttcaatccctggcactgggatggatatttggggca
gagcggttgtatggcatcataaaggacatgacaggtgtgcaagccaactcgttctttaaa
atctgctggctttacctcacaccactggtctctctgggctcttttatatgttctttagtt
tggtaccagcctctgacctttaatcgctggtacgtgtacccagcttgggcatacacgttg
ggctgggtactggccctttcctccatcctgctcgtgccgggatgggcgctgtataagctg
ggaactgggactgggaacctcagtcagcgtttccatcatctgtgccgacctgaccctggc
tgctcactgacccaaaaaggagaaactgagctgcagcacatcggaggggaagatcggcac
cggctcacagtcatttga
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