Siniperca chuatsi (mandarin fish): 122878509
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Entry
122878509 CDS
T08948
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122878509 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122878509 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122878509 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
schu03029
]
122878509 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122878509 (si:ch211-11n16.2)
Membrane trafficking [BR:
schu04131
]
Autophagy
Other autophagy associated proteins
Others
122878509 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
122878509 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
GBP
MqsA_antitoxin
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
122878509
NCBI-ProteinID:
XP_044057259
LinkDB
All DBs
Position
LG7:complement(7921055..7933287)
Genome browser
AA seq
655 aa
AA seq
DB search
MSEILMKEMESISISSMTAEKRPGGVPSFLLVDEQENLQVRDESDFVDRLGCGDVAGVKV
LSIFGNTGDGKSHTLNHILFGGESVFYTSKSPSSCTVGVWAAYDPTLSLVALDTEGLLGA
AANQNQRMRLLLKVLAVSDIVVYRTRAERLHNDMFLFLSSASGAYLKHFTPELRALSSRC
GLDVPLSSLGPAVIVFQETTHTQLLGHDSKVGGHADTLLQKRFHDLGLGTEAFSSVQYVG
SQTITPPTDYNRLLEAVRQQVKNTHTRSPRQPGIVFHALEALSERFCGELSDDKMTLYSF
FPDEYFTCSAVCLSCNIRCKNGMNHLKDRVPHMADGLCQYAHQYNNKVLICKRCYEGGRE
VIVVPKTSASSDNPWFGLAKYAWSGYVLECASCGVIYRSRQYWMGNQDPESSVVRSEVKH
VWEGSDTFLTTHQNAAQRVLDGMNFMIQSVSEYSTGPTKAVTAWLTDQVAPPYWRPNTEI
TACHGCQKVFEEAERKHHCRSCGEGFCHPCSSHRMPVPERGWGSGPVRVCKACYRQGGPA
DTNSQVCKVEPRGLIARRVTEVAQSTLDMVTTAVDYPLCFVKDVARPDYWVPDQDITQCH
QCSKTFTSAMSKHHCRACGQGVCGPCSTHIRPVPSRGWDHPVRVCDSCHARTDSL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaatactgatgaaagaaatggagagtatatcgatcagttcaatgacggcagag
aagcgtccaggcggtgtcccgagcttcctgctggtggatgaacaagaaaacctgcaggtc
cgcgatgagtctgactttgtggacagacttggctgtggggacgtggcaggagtcaaggtc
ctctccatctttggcaacaccggtgatggcaagtcacacaccctcaaccacatcctattc
ggtggtgagagtgtgttctacacctccaagtcccccagctcctgtacggtgggagtgtgg
gccgcgtatgaccccaccctcagcttggtcgccctggatactgagggcctgttgggggct
gcagccaatcagaaccagagaatgcggctgctgctaaaggtattggcagtgtctgatata
gtagtctatcgtacacgggcagagcgccttcacaacgacatgttcctgttcctgagcagc
gcctcgggggcctacctgaagcatttcaccccggagctcagggccctctccagccgctgt
ggtctggacgtgcccctctcttctcttgggccggcagttatcgtcttccaggagacaacg
cacactcagttgctcggccatgattctaaggtgggtggccatgccgacacactgctccag
aagcgttttcacgacctgggcttggggacagaggccttcagctcggtgcagtatgtaggc
tcccagaccatcactcctcccactgactacaacaggctgctggaggccgtgaggcagcaa
gtgaagaacactcacacacgctccccccgccagcccgggatagtgtttcacgctttggaa
gccctaagtgagcgtttctgtggagaactgtcagacgacaagatgaccctatactcattc
ttcccagacgaatacttcacctgctccgctgtctgcctcagctgcaacattcgctgtaaa
aatggaatgaaccatctgaaagacagggtcccccacatggcagatggactgtgccagtac
gcacaccagtataacaacaaggtccttatctgtaagaggtgctatgaaggaggcagagag
gtgattgtcgtgcccaagacgtccgcttccagtgacaacccatggtttggactggccaag
tatgcctggtcaggctatgtgttggagtgtgctagctgtggtgtaatctaccgcagcaga
cagtactggatgggaaaccaggaccctgagagcagcgtggtgcgatctgaggtcaagcat
gtctgggaggggtcggatacctttctgaccacccaccagaacgctgcccagagggtgctg
gatgggatgaacttcatgatccagtcagtgtcggagtacagcaccggccccaccaaagct
gtcactgcctggctcactgaccaggtggcgccgccatactggagacccaacacagagatc
actgcctgtcatggctgtcagaaggtgttcgaggaggcggagaggaagcaccactgccga
tcatgtggcgagggtttctgccatccctgctccagccacaggatgccggtgccagagaga
ggctggggcagtggccctgtcagggtgtgtaaggcctgctaccgacagggagggccagct
gacactaacagccaggtgtgtaaggtggagcctcgtggtctaatagctcgcagggtgacg
gaggtggcccagtccacactggacatggtcaccacagctgtggactaccctctctgtttt
gtgaaagatgtggctcggccagactactgggtgccagaccaggacatcacccagtgccac
cagtgctccaagaccttcacttcggcaatgtccaagcaccactgcagggcctgcggacag
ggtgtgtgcggtccctgctccacgcacatcaggcctgtgccctcccgaggctgggaccac
ccagtcagagtgtgtgacagctgccacgcccgcacggatagtctgtga
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