Siniperca chuatsi (mandarin fish): 122878547
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Entry
122878547 CDS
T08948
Symbol
slc6a4a
Name
(RefSeq) solute carrier family 6 member 4a isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122878547 (slc6a4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schu02000
]
122878547 (slc6a4a)
Transporters [BR:
schu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122878547 (slc6a4a)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
122878547
NCBI-ProteinID:
XP_044057343
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Position
LG7:complement(9017180..9039547)
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AA seq
712 aa
AA seq
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METKDMMKTSMLTMDKGENEGERDKGREEVGGEEEGTQQENGRLMLADGFAERGPKSLTS
GSGQQVSNGFTTSTPQSPREGPGTAACAGGTASGPGGGTGSSVPLGGLRTLVVQQTSLDR
PRETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYMEL
ALGQFHRSGCISIWKHICPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRPTLPW
TTCSNSWNTANCNRYMSTDHNVSWSNSSTSPAEEFYIRQVLQVHLSPGLHQLGSVSWQLA
LCLLFIFTIVYFSIWKGVKTSGKVVWVTATFPYLVLLVLLIRGATLPGAWRGVVFYLKPD
WKKLLSTTVWIDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALVTSSVNCLTSFLSG
FVIFTVLGYMAEMRQQDVDAVAKDAGPSLLFIIYAEAIANMPAATFFSIIFFLMIIMLGL
DSTFAGLEGVITAMLDEFPHILVKRREWFVFGLVCVCYLGALSTLTYGGAFVVKLFEEYA
TGPAVITVVLLEVIAVSWFYAQIVNCGADLFRYCSDPQLSQTHESSDWVCLCVSVCVPGT
NRFCNDVQDMLGFYPGCFWRVCWVAICPCFLLFIIISFLAFPPEVRLFHYHYPPWTTVLG
YCIGVSSFICVPAYMVYHLLNAKGTFKQRLLKSITPEPSSDQHRDFIVTNAV
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaagatatgatgaagacgagcatgttgacaatggacaaaggagagaatgag
ggagagagggacaaagggagagaggaggtggggggagaagaggaggggacgcagcaggaa
aatggtagactgatgctggctgatggttttgcagagagaggacccaagagcctgacctcc
ggctctggacagcaggtgtccaatggctttaccacatccacccctcaaagccccagggag
ggaccagggaccgcggcttgcgctggaggtacagcctctgggcctggaggaggcaccggt
tcgtcagtgccactgggaggcctcaggactctggtggtccaacaaactagcttggatagg
cccagagaaacctggagcaagaagatggacttcttgctctctgtgatcggctacgctgtg
gacctgggaaatgtctggcgcttcccttacatctgctaccaaaatggaggaggggccttt
ttgctgccctacctgttgatggcagtgtttggaggtgtccctctcttctacatggagctg
gctctcggccagttccaccgcagcggctgcatctccatttggaaacacatctgccccatc
ttcaaaggcatcggctttgccatctgcatcatagccctctacatcgccttctactacaat
accatcatggcctgggccttgtactacctactatcatcatttcggcccaccctgccctgg
accacctgcagcaacagctggaacaccgccaactgtaaccgttacatgtccaccgaccac
aatgtgtcgtggtccaactcctccacctcccccgccgaggagttctatattcgccaggtg
ttgcaggtccacctctccccaggtctgcaccagctgggctctgtcagctggcagctggcc
ctctgcctgctcttcatcttcaccattgtctacttcagcatctggaaaggagtcaagacg
tctggaaaggtagtttgggtgactgctacctttccctacctggtcctcttggtgttgctc
atccgtggggccactctgccaggggcctggaggggtgtggtcttctatctcaaacctgat
tggaagaagctgcttagcactacagtgtggattgacgcagcagctcagatcttcttctca
ctgggtccgggcttcggcgtgctccttgcctttgccagctacaacccatttcacaacaac
tgctacaaagatgctttggtcaccagctctgtgaactgtctgactagctttctgtctggc
tttgtcatctttaccgtgctgggctacatggctgagatgaggcagcaggatgtggatgct
gtggcaaaggatgctggtcccagtctgctgttcatcatttatgcagaagccatagcaaac
atgcctgctgctactttcttttccatcatcttcttcctcatgatcattatgttgggtctg
gacagcacgtttgcagggttggagggggtgatcacagctatgctagatgagttccctcat
atcttggttaagagacgagagtggtttgtcttcggcctggtgtgtgtctgctacctcggg
gctctctccacactcacatatggaggagcgtttgtggtgaagctgtttgaggagtatgca
acaggccctgcagtcatcactgtggtcctgcttgaagtcatcgctgtttcctggttctac
gcacagattgtgaactgcggtgctgacttattccgatactgttccgatcctcagctctca
cagacacatgagagtagtgattgggtgtgtctgtgtgtgtctgtgtgtgttccaggtacc
aaccgtttctgtaatgacgtccaggacatgcttggtttctacccgggttgtttctggagg
gtctgctgggtggccatctgcccttgctttctgctgttcatcatcatcagtttcctggcc
ttccctccagaggtcaggttgttccactaccactacccgccatggaccactgtcctgggc
tactgcatcggggtgtcttcgttcatctgtgtgcctgcttatatggtctaccacttgctc
aatgctaagggtacattcaaacagcgtctgttaaagagtatcactcctgagcccagcagt
gaccaacacagagacttcattgtcaccaatgcagtctga
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