Siniperca chuatsi (mandarin fish): 122878812
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Entry
122878812 CDS
T08948
Symbol
limk1a
Name
(RefSeq) LIM domain kinase 1a isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122878812 (limk1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
schu01001
]
122878812 (limk1a)
Enzymes [BR:
schu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122878812 (limk1a)
Protein kinases [BR:
schu01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
122878812 (limk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
ABC1
PDZ_2
RIO1
RelB-like
Haspin_kinase
PDZ_4
B2
Motif
Other DBs
NCBI-GeneID:
122878812
NCBI-ProteinID:
XP_044058132
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All DBs
Position
LG7:complement(16519554..16574072)
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AA seq
674 aa
AA seq
DB search
MRLMLLCCTWKDERMGEEEAGGSLPVCAGCKQRIYDEQYLQALSSDWHTVCFRCCECSSS
LSHWYYEKDGQLFCKKDYWAKFGELCHGCNDPINTGLIMVAGEQKYHPECFTCLNCRAFI
GDGDTYALVERSKLYCGHCYYQTIVTPVSLPDSPCSRIPHTVTLVSIPGSAEGNNGRRGR
GFSVAIDQPLSPTNGYSPEHGHTVRVSQVDADCISPDVKNSIHVGDRILEINGTPIHNVP
LDEIDLLIQETSRLLQLTIEHDPHSQGQEAGSSEAEEQVDGPLSTPLSEGPSPILPITQP
PNPNISSLRSRIITRSYSIDKSPGSSNAASPNSQRKDINRSESLRVVSNQTHRIFRPSDL
IHGEVLGKGCFGQAIKVTHKETGEVMVMKELIRFDDETQRTFLKEVKVMRCLDHPNVLKF
IGVLYKDKRLNFIAEYIKGGTLREIIKKMDSNYPWNQRVSFAKDIAAGMTYLHSMNIIHR
DLNSHNCLVRENNTVVVADFGLSRLMVDDKHEEKLSQGKLPGLKRPDRRKRYTVVGNPYW
MAPEMIHGKSYDERVDIFSFGIMLCEIIGRVNADPDYLPRAMDFGLNVSGFLEHYCPPNC
PPAFFPMAAVCCDLDADKRPAFSKLDEWLENLKMHLDIGLPLVSEVDQLHKAFWENHSST
RPENGLHTHPEQPE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgctgctctgctgcacctggaaggacgaacgcatgggagaggaggaagct
ggaggaagtttgcccgtctgcgcgggatgcaaacagaggatctacgatgagcagtacctc
caggccctcagcagtgactggcacaccgtctgcttcaggtgttgtgagtgcagttcctcg
ctgtcccactggtattatgaaaaggatggacagctcttctgcaagaaggactactgggcc
aaatttggggagctgtgccacggctgcaacgacccgatcaacaccggcctcatcatggtc
gcaggggaacagaaatatcacccagaatgcttcacttgtctgaactgcagggcgttcatc
ggtgacggagacacatacgctctggtggagagatccaaactctactgtggccactgttac
taccagaccattgtcactccggtgtcactgccggactcgccatgctcacgaatccctcac
accgtcacactcgtgtccatcccaggctcagcagagggcaacaacgggcgcagaggccga
ggtttctctgttgccatcgaccaaccgctcagcccgaccaatggctacagccctgaacat
ggacacactgtcagagtctcccaggtggacgcagactgcatcagtccagatgtgaaaaac
tccattcatgttggagataggatccttgagatcaacgggacgcccattcacaatgtccct
ctggatgagatcgacctgctgatccaggagacgagccggctgctacagctcaccatcgaa
cacgaccctcacagtcaagggcaggaggcaggctcctccgaggccgaagagcaagtggac
ggccccctgtccacccctctgtcagagggccccagccccatcctgcccatcacccagccc
cccaaccccaacatcagcagcctgagatcccgcatcatcacgcggagctacagcattgat
aagtcaccaggctccagcaatgcagcgtcccccaactcccagaggaaggacatcaatcga
tcagagtcgctccgtgtcgtgtccaaccagacacaccgcatcttccgcccatctgacctc
atacatggagaggtgctggggaagggctgctttggacaggccatcaaggtgacccacaag
gagacaggggaggtgatggtgatgaaagagctgattcgctttgatgacgagacacagaga
acattcctgaaggaggtgaaggtcatgcgttgcctcgatcatcccaacgtgctcaagttc
attggagtcctctacaaggacaagaggctcaacttcatcgcagagtacataaagggaggc
accttgagggaaatcatcaagaaaatggacagcaactatccctggaaccagcgggtcagt
tttgccaaggacatagctgctgggatgacatatctgcattccatgaacataatccaccgg
gacctgaactcacacaactgtctagtccgagagaacaacacagtggtggtggcagacttt
gggctgtctcggctcatggtggacgacaagcacgaggagaagttgtcacagggtaaactg
cccggcctgaagaggcccgaccgtagaaagaggtacaccgtggtgggaaacccctactgg
atggctcctgagatgatccacgggaagagctatgatgagagagtagacatcttttccttt
ggtatcatgctctgcgagataattggcagggtgaacgcagacccagactacctccccagg
gcgatggactttggactgaacgtgtctggtttcctggagcactactgtcccccaaattgt
ccccccgccttcttccccatggctgctgtgtgctgtgaccttgatgcagacaaacggcct
gctttctccaaactggatgagtggctggagaacctgaagatgcacttggacattggtcta
cccctggtgtctgaagtagaccagctacacaaggccttctgggagaaccacagctccact
cgccctgaaaacggcctgcacacccaccccgaacagccggagtag
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