Siniperca chuatsi (mandarin fish): 122878855
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Entry
122878855 CDS
T08948
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122878855 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
schu01007
]
122878855 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schu03016
]
122878855 (farsb)
Enzymes [BR:
schu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
122878855 (farsb)
Amino acid related enzymes [BR:
schu01007
]
Aminoacyl-tRNA synthetase
Class II (U)
122878855 (farsb)
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122878855 (farsb)
Prokaryotic type
122878855 (farsb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
EF1_GNE
PhetRS_B1
B5
B3_4
EF-1_beta_acid
Arc1p_N_like
EAD7
Motif
Other DBs
NCBI-GeneID:
122878855
NCBI-ProteinID:
XP_044058256
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All DBs
Position
LG7:6521052..6538896
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AA seq
847 aa
AA seq
DB search
MPTVGVKRDLLFKALGRTYTDEEFDELCFEFGLELDEITSEKELISREQGDSKASGASDT
ILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEAPRYRRVSPASGEPQKLIITKETAAVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRSLVAIGTHDLDTISGPFTYTAKPPG
DISFTPLNQTKEYTATQLMSLYKTDSHLRHYLHIIEDKPVYPVIYDSNGIVLSMPPIING
DHSKIALKTKNVFIECTATDLTKAKIVLDMMVTMFSEYCSQPFTVEEAEVVYPDGKTCKY
PELAYRKEKLSSEFINRKVGINESTEKIAQLLTRMCLRSQATGVGDEIEVEIPPTRSDII
HACDIMEDAAMAYGFNNITRTTPRTYTIANQFPLNKLTELLRQDLAAAGFTEALNFALCS
QEDIADKLGKKISETRAAHISNPKTAEFQVARTTLLPGLLKTLAANRKMPLPLRLFEISD
VVLKDETKDVGARNSRRFCAVYYNKSPGFEVIHGLLDRTMQLLEVKSVRGDGYHIQAADD
STFFPGRCAEIFVHGKSVGRLGVLHPDVVNRFELTMPCSALEMDIEPFLGHTAETTLTHD
VPMQEVIKHKFSTQDESSQAPSFHPASTKTVFGDMSTPAGLKALNHFLADKSYMEGFVAS
QADVAMFNAIPSAPSPTLCHLMRWYNHIKSFQRERASLPSAKSQFVLPATPPASTNNASD
DDIDLFGSDDEAESAEAATIKEQRLAEYAAKKSKKPALIAKSSILLDVKPWDDETDMGKL
EECVRSVKMDGLLWGQSKLVPVGYGIKKLQIGCVVEDDKVGTDLLEEAITAFEEYVQSVD
VAAFNKI
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagtaaaaagggatcttctcttcaaagctttgggcagaacatacact
gatgaagagtttgacgagctgtgctttgaatttgggctggagctggatgaaattacctca
gagaaggagctaatcagccgagagcagggtgactccaaggcatcaggagcatctgacacc
atcctgtacaagattgatgtaccagctaaccgctatgacctgctgtgtctggaaggactg
gttcgtggactacaggtcttcaagaataagttggaggcacctcgctacagacgtgttagc
ccggccagcggggagcctcagaagctcattattactaaggagacggcggcagtgcgaccc
catgctgtggcagcagtgttgaggaacatcaccttcacgcaggagcgctatgacagcttc
attgagctgcaggagaaactccaccagaacatctgcaggaagaggagcctagtggccatt
gggacccatgacctggacaccatctctggtccttttacatacacagccaaacctcccgga
gacatcagcttcacacccctcaaccagaccaaagagtacactgccacccagctcatgagc
ctctacaagacagacagccacctgaggcattaccttcacattattgaagacaagcctgtg
taccccgtcatctacgacagcaatggtattgtcctatccatgcctcccatcatcaatggg
gaccattcaaaaatcgcgctaaaaacaaagaacgtcttcattgagtgcacggccacagac
ctgaccaaggcaaagatcgtgttggacatgatggtgaccatgttcagcgagtattgttca
cagcctttcacggtagaggaggctgaggtggtgtacccagatggcaagacctgcaaatac
ccagagctggcttacaggaaggagaagttgtccagcgagtttatcaaccgaaaggttggc
atcaatgagtcaactgagaaaatcgcccagctgctgaccaggatgtgccttcgctcccag
gctacaggtgttggtgatgagatcgaggttgagatcccacccacgcgctcagacatcatc
cacgcctgtgatatcatggaggacgccgccatggcctacggtttcaacaacatcactcgc
accacaccacgcacctacaccatagccaaccagttcccactgaataaactgacagagctg
ttgagacaagacctggcagctgctggattcacagaggccctcaactttgccctgtgttct
caagaagatatagcagacaagcttggaaagaagatctcagagaccagggcagctcatatc
tccaaccccaagacagctgagttccaggtggcgcggactaccttgctgccaggcctgctg
aaaaccttggctgccaacaggaagatgccccttcccctcagactgtttgagatatctgac
gtagtgctgaaggatgagacgaaagatgtcggggcgaggaacagccggcgtttctgtgcc
gtttactacaacaagagtcccggcttcgaggtgatccacggcctgctggaccggaccatg
caactgctggaggtgaagtccgtccgcggggatggctaccacatccaggctgcagacgat
tccacctttttccctggtcgctgcgccgagatctttgtccatggaaagagcgtagggcgt
ctcggggtcctccacccagacgtcgtcaaccgcttcgagctgaccatgccctgctcggcc
ctggagatggacatcgagcccttccttggccacactgctgaaaccaccctcacacacgac
gtccccatgcaggaagttatcaagcacaagttttccacgcaagatgaatcctcgcaggcc
ccgtccttccatccagcttccacaaaaactgtgtttggtgacatgagcacgccggccggc
cttaaagctctcaatcattttctggcagacaaaagctacatggagggctttgtggcgtcc
caggctgacgttgcaatgttcaacgccatcccttctgctccctcaccgacattgtgccac
ctcatgcgctggtataaccacatcaagtcattccagagggaaagagccagcctcccatca
gctaagagtcagtttgtcctcccagctactccccccgcctcgacaaacaacgccagcgat
gacgacatcgatctgtttggctcggacgacgaggccgagagtgccgaggcggctacaatc
aaagagcagcgcctggccgagtacgccgccaagaagtccaagaagccagctctcatcgcc
aagtcctccatcctgcttgacgtcaagccctgggacgacgagacggacatggggaagctg
gaggagtgcgttcgcagcgtcaaaatggacgggctgctgtgggggcagtccaagctggtc
ccagtaggctacggcatcaagaagctccagataggatgcgtggtggaggatgacaaagtg
ggcacggatttgctggaggaagccatcaccgcctttgaggaatatgttcagtctgtggac
gtggctgccttcaataagatctga
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