Siniperca chuatsi (mandarin fish): 122878903
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Entry
122878903 CDS
T08948
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122878903 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122878903 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122878903 (usp16)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122878903 (usp16)
Peptidases and inhibitors [BR:
schu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122878903 (usp16)
Ubiquitin system [BR:
schu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122878903 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
122878903
NCBI-ProteinID:
XP_044058335
LinkDB
All DBs
Position
LG7:complement(24805717..24812174)
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AA seq
849 aa
AA seq
DB search
MGKKRGKDKSSREEDDIDLTGPSCRHIKKGTDQTLLKKLSGNSDWTSCQDCKHEENKENI
SSTLPQDSEEEQETAAVWMCLKCGHRGCGRSSENQHAIKHYETPRSDPHCLVVSLDNWSV
WCYICDDEVQYSRTGHLAQLMTNLKKQTSADPIKRPEKRVKEEDSLLEVEQKREIVKAED
KENKENKDHQKKNIKKESVGKSQKSGTSEDNGSISVKGLSNLGNTCFFNAVIQSLSQTQL
LRQTLNKVIEEKISLNIKPVASLDLEPIVVQLDQPGSLTLAMCQLLNEIQESKKGVVTPR
ELFTQVCKKAARFKGFQQQDSQELLRYLLDGMRAEEIKRVSSGIMEALKESRKSTDGEQL
KTLVKEYEKNGFPKNFVDQVFGGEMTSTIMCQQCKTVSVVTEMFLDLSLPVSDEAYRKKN
QKKGVQNTSESRQDGRNSPALTNGNNDIPSGASSKYQQKKAKKQAKKQAKHQKRQQKLEG
RVTLDSLTSPSHTESEQTDFTADAKDAGNSDNETHAEADLTKGNPAQISVSEQDQENLDT
IQDEKEKEEDEDSVIDCDSSATSSVSNRFTVLSEEQNSKDSILDDDKISDMDQEAEEDTQ
LLSEMEKVTLDDAFIEDTDAVEQGMESEDEPLEAKEYTVVNQDPELAFHTLATRVAPEKQ
ECSVQSCLFQFTEVETLTQNNSLLCVTCTKRQPNKDKAGGSKKNIYTDALKQMLISSPPP
VLTLHLKRFQQNGYSICKVNRHVQFPLILDLAPFCGVKCKNVTEGDTQILYSLYGIVEHS
GTMRSGHYTGYVKVRPECPKPSSNELAAEGDAKPPRGSWFHISDTSVQPVSESKVQSCQA
YLLFYERIL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaagggggaaggacaagagctccagagaggaagatgacattgacctgaca
ggtccatcttgcagacatattaagaagggaacagaccaaactcttctaaagaaactctct
gggaattctgattggacgagttgccaggattgtaagcatgaagaaaataaagaaaatatc
agctccaccctgccacaggactctgaagaggaacaagaaacagcagccgtatggatgtgc
ttgaaatgcggccatagaggatgtggacgaagctctgagaaccagcatgccatcaaacat
tatgagactcctcggtcagatccacattgcctggtggtcagtttggacaactggagtgtg
tggtgttacatatgtgatgatgaagtccagtactccaggactggacatttggctcagctg
atgaccaacctaaaaaaacaaacctctgcagatcctataaagagaccggagaaaagagtg
aaggaggaagacagtttgttggaagttgagcagaagagagagattgtaaaagcagaggac
aaggaaaacaaagaaaacaaggaccaccaaaagaaaaacatcaagaaagagagtgttggg
aaatcacaaaagtctggcacatctgaagacaatggtagtatttcagtaaaggggctgagc
aacctgggaaacacctgtttctttaatgcagtcattcagagtctctctcaaacacagctc
ttaagacagactctcaacaaagtgatagaagagaaaatcagtcttaacattaaacctgtt
gcctccttggatctggagcctattgtagtgcagttagaccagcccggatccctgacttta
gctatgtgtcaactactcaatgaaatccaggaatccaagaagggtgtggtaacacctcga
gagttgttcacacaagtttgtaaaaaggctgccaggttcaaaggatttcagcagcaagat
agccaggagctgctgcgctaccttctggatgggatgcgagctgaggagatcaaaagagta
agctcggggatcatggaggcattaaaagaatctagaaaaagcacagatggagagcagctg
aaaacactagttaaagagtacgagaaaaatggatttccaaaaaactttgtggaccaagtt
tttggtggggaaatgaccagcactataatgtgtcagcagtgtaaaacagtgtctgtagtc
acagagatgtttttggatctttcccttcctgtttccgatgaggcatacagaaagaagaac
cagaaaaaaggagttcagaacaccagtgagtcgagacaggacggcagaaacagccctgct
ttgacgaatggaaataatgacatccccagtggggccagcagcaagtaccagcagaagaaa
gccaagaagcaggcaaagaagcaagcaaagcatcaaaagaggcagcagaagcttgagggc
agagtcactttggacagtctcacatctccgagccacacagagagcgaacagacagatttt
actgcagatgcaaaggatgcgggaaattctgacaatgaaacacatgcagaagccgacctg
actaaaggaaatcctgcacaaatcagcgtgtctgaacaggaccaggagaaccttgacacg
atccaggacgagaaggaaaaagaagaggacgaagattcagtgattgactgcgactcatca
gctacgtcatcggtcagcaatcgttttactgtcttatcagaggagcagaactcaaaggac
agcatattagatgatgacaaaatatctgacatggatcaggaagcagaagaggacacacaa
ctgttgagtgaaatggagaaagtaaccctggatgatgccttcatagaagacactgatgct
gtggagcaaggcatggagagtgaagatgagccactggaggctaaagagtacactgtagta
aatcaggacccagagctggcctttcacacactggctaccagggtggcccctgagaaacag
gagtgttcagtacagtcatgcctttttcagttcacagaagtggaaaccctcacgcagaac
aacagcctgctatgtgtcacctgcaccaaacggcagccaaacaaagacaaagctggagga
tccaagaagaatatctacactgatgccttgaagcaaatgctgatctcctctcccccacca
gtgcttacccttcatttgaagagatttcaacagaatggatacagtatttgtaaagtgaac
agacatgtccaattccccctgatactggatctagcgcccttctgtggggttaagtgcaag
aacgtgacagagggagacactcaaattttgtacagtttgtacggtatcgtagagcacagt
ggaacaatgaggtcaggtcattacacggggtatgtaaaagtacgacctgagtgccctaaa
ccctcatccaatgaacttgcagcagaaggagacgcaaagccacccagaggatcatggttc
catatcagcgacacaagcgttcagcctgtgagcgagagtaaagtccagagttgccaagcc
tacctcctcttctatgaaagaatcctctaa
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