Siniperca chuatsi (mandarin fish): 122879146
Help
Entry
122879146 CDS
T08948
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122879146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122879146
Membrane trafficking [BR:
schu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
122879146
Endosome - Golgi transport
Arf GTPase associated proteins
122879146
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
122879146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
RA
SAM_2
PH_11
PH_6
PH_8
PH_3
PH_13
Motif
Other DBs
NCBI-GeneID:
122879146
NCBI-ProteinID:
XP_044058839
LinkDB
All DBs
Position
LG7:complement(13780007..13834292)
Genome browser
AA seq
1629 aa
AA seq
DB search
MSQSESCATVWDWLCVLRLEQYSEAFQNAGLSTLPQCRNLTPDQLERMGITLPGHQRRIL
ASLNKTHSNNETQSDTHSHLVQSERDQRLEETGHGKVLQRERPVPIPVGKKPVLKEREKR
DGETSRPTPREREKPVPRERQVSRMKEERGEGGEKKPVPGQRQTAPRGGKEEERDGRIDG
ERERPVPKERTRFRSTAPVDCLPSPLVSLSSDTSLPPVPPRSTPNCPPQCFTSSLSPSPP
TRTPASPKLDRHAVKAPAIQSRYVSHSSTLISSSTLISTSTHTPTHAPPPPSNFPSAQTL
PQTLAIQPPAQHLGSDGDKQTSPVSPIASPSDDRNAPPLPPKSGAVPKGPPAISQRFPAQ
SPSTHSPSPTKMVPDEMQKDQTPQVLPCIRTPQTLENAQHSTQPDAQPALPAKSISQPPS
ESRLGSLDDNSDDYEDPDLAYPSVHRMNTPDRDMSLQVPGQAKGRYNSFCSDDELLGDDE
PTLWQDGEISNLQGSVYLPNTGRLTAATKEDNSQLAAVIKIGWLDKNPPQGALYYQRRWV
KLDVDYLRYFDNDKEVYSKGIISTAFITNVTSVGELKFEVVTNNRTFIFRAESEVERNDW
VTVLQDCTRGRSERSTMSLGSPLTPDYQGYLELRGLRSKLYTVVASDKVFLYKNIEDYRI
GVGITSIEMNVGNVKDTDRRSFDLTTPYRIFSFIAESEQLREQWVDAMRDAIDEALSNSE
VAERIWAEPSNSLCADCGAPKPEWAAINLCVVVCKRCAGEHRGLGPSISKVRSLKMDRKV
WTEELVQVFLLLGNERVNSFWAANIPPSEALTPSSCSEDRRRFITNKYRQGKYRKYHPLY
GNQRELNNALCINVQCSDVLETLSLIFCGADVNCSTGMASWPSPLSLANAHSQPLQAELL
SHNLNTELPRSEVGGAMEAVHYSAPPCVSHNGFLFKTASMARAVTERKAREEFSRRWCTL
NDGIFSYYESDRNSNPNGTLKASEIVCLAVDPPEKHGYDHTFELYSESERLYLFGIDDPD
SHKEWVKSIAKTFIPATAEPLLRLGFERIGRLKCKDGLNLQTSKVGWFALVGSTLHAYLA
DSQGEEIHLRKLNELSIQQDNEVLVLVERGRTLYIEGERKMDFAGWCGAIQAAAGSGGDT
LSQQQLTETDIPVIVHSCIGYITQCGLTSEGIYRKSGVNSRVAALCERFRCDARSLRLRE
GEHQVDDVSNTLKRFFRELEEGLFTSEDGSTWLSTAAIQDESMKISQYQLLFNRLPRVNK
ATLQALINHLYCVQRFSELNQMNLHNLAIVFGPTLFQTDGKDYTAGRAIEDLIQHYTHIF
EVDEQQLKKQLDEITVIIQVREKLNTKFPSTEPGGHFICTVYLEEKKDTAEQHVKIPGSM
TAAELTCEVLDRRNIPVKSKEYWSCWEVCDKEEMERPLHYQERVLPILHSSGTDSDLLIK
KHVAMDAMIVYLASKVDVSKHGMMKFREERSILGLGLSTGSFHDRYFILNSTSLRMYKEV
RSNRPERDWPVKNLKVYLGIKKKLRPPTCWGLTVVCESKKQEKPERQQWYICCDTQSEMR
EWYATFLSIQYNGDVWPQDGLQQTRVSRVLPDTRHGNVSLIPLRGSENEMRNSVAAFSQD
PLALFRDVR
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtctgaatcctgtgcgactgtgtgggactggttatgtgtgcttcgtctggag
cagtattctgaggcatttcagaatgccgggctgtcaacgttaccacaatgtcgcaacctc
acaccagatcaactggagcggatgggcatcacactgccgggtcaccagagacgcatcctg
gctagcctgaacaaaacacatagtaataatgaaacacaatctgacacacactctcacctt
gtacagtctgagagagatcagagattagaggaaacagggcatggcaaagtgttgcagaga
gagagacctgtgcctatcccagtgggaaaaaaacctgtcctgaaggaaagggagaaaaga
gatggagagacatcgagacctacacccagggaaagagagaaaccagtccccagggagaga
caagtgtccaggatgaaagaggaaaggggtgaaggaggagagaagaagccagttcctgga
caaagacaaacagcacctagagggggaaaagaggaagagagggatggaagaatagatgga
gagagagagaggcctgtgcctaaagagaggactaggtttcgctctactgctccagtggac
tgtctccccagcccccttgtctctctatcgtctgacacctctttaccccctgttccccca
cgaagcacccccaattgccctccacagtgcttcacctcttccctgagcccctcacctcct
actcgaacccctgcctctcctaaactggacagacatgcagttaaagccccagctatacag
agcagatatgtgtcccacagttccaccctcatcagcagttccaccctcatcagcacctcc
acccatacccccacacatgcacctcctcccccttccaacttcccctctgcccaaactctg
cctcagaccttagccatccagccacctgcccaacatttgggtagtgatggagataaacaa
acttcacccgtctcccccattgcttccccaagtgatgacagaaatgctccacctctccct
ccaaaatcaggggcagtacctaaaggccctccagcaatctcacagcggtttcctgcacag
tctcccagtactcacagcccctcacccaccaagatggtccccgatgagatgcagaaagac
caaactccacaggttctaccttgcatcaggacaccccaaactctagaaaacgcacaacat
tcaactcaacctgacgctcagccggctctgcctgctaagagtatctcccaacctcccagt
gagtcaaggttgggctcactcgatgataattctgatgactacgaggatccagacttggct
taccccagtgttcatcgaatgaacacaccagacagggatatgtccctgcaagttcccggt
caggcaaaaggacggtacaattctttctgcagtgatgatgagctgttgggtgatgatgaa
cctaccctgtggcaggatggggaaatcagcaacctgcaaggcagtgtctacctgccaaac
actggcagactgactgcagccactaaagaagacaactctcagcttgctgctgtcatcaag
attggctggctggataagaatccacctcaaggggccctttattatcagagacgatgggta
aagctggatgttgactacctgagatactttgacaatgacaaggaggtgtattctaagggg
atcatctctactgccttcatcactaatgtgaccagtgtgggagagctgaagtttgaggtc
gtcacaaacaaccgaacattcatcttcagggctgaaagtgaagttgagagaaacgactgg
gttactgtactgcaggactgcaccagggggcgctctgagcggagcaccatgagccttggc
tcacctttgaccccggattatcagggctatctggagctcagaggattacgctccaaactt
tatactgttgtcgcctcagataaagtcttcctctacaaaaacatagaggactatcgtata
ggtgtgggtatcacatctattgagatgaatgtaggaaatgttaaagacacagatcgtcgt
agctttgatctcaccacaccgtaccgcatattcagtttcatcgcagagtcagagcagctg
cgagagcagtgggtggacgccatgcgggatgccatagatgaggccttgtcgaatagcgag
gtggcagagcggatctgggcggagcctagcaacagtctctgtgctgactgtggggctccc
aagccggaatgggctgctatcaacttgtgtgtggtggtctgcaaacgatgcgcaggagag
cacagaggactgggtcctagcatctcaaaggttcgtagtctgaagatggataggaaagtc
tggacagaggagcttgtacaggtgttcctgttgttaggcaacgagcgggtgaacagtttc
tgggcagctaacatcccgccgagtgaagctttgactccctctagctgcagcgaagacaga
cggcgcttcatcaccaacaaataccgccagggcaaatacaggaagtaccaccctctttac
ggaaaccagagagagctcaacaatgctctatgtataaatgtgcagtgcagtgatgtgctg
gagacgttaagcctgattttctgcggtgcagatgtgaattgttcaactggtatggcaagt
tggccctcccctctctccctggccaacgcacactcacaacccttacaggctgagttactt
agccacaatctcaacacagagctaccacggtcagaggtgggcggggccatggaggcggta
cattactcagcaccaccttgtgtgtctcacaatggcttcctgttcaagactgcatccatg
gctcgggctgtcacagagcgcaaggccagagaggagttcagtcgtcgctggtgcacgcta
aatgatggaatcttcagctactatgagagtgacaggaactcaaaccctaacggaactctg
aaggcttcagagatagtgtgtttggctgtcgacccgcctgagaaacatgggtatgaccat
acttttgaactctactcagagtcagagcgtctctatctgtttggcattgatgacccagac
agccacaaggaatgggtcaagtctattgccaagacctttatcccagccactgcagaacct
ttactgaggttgggctttgagcggattggacggctgaagtgtaaagacggcttgaaccta
caaacctccaaggttggttggtttgctctggtgggctccacacttcacgcctacctggcg
gacagccagggagaggagatccacctccgcaaactgaacgaactctcgattcaacaagac
aatgaggtgctggttctggtggagagaggcagaactctgtacatagagggagagaggaag
atggattttgccggctggtgtggggccatccaggcggcagcagggagtggaggagacaca
ctaagccagcagcagttgacagagacagacatccctgtcatagtacacagctgcatcggc
tacatcacacagtgcggcttgacgtctgaggggatctatcgtaagagtggtgtgaactcc
cgtgtggcagcgttgtgcgagagattccgctgtgatgctcgcagtcttcgtctgagggaa
ggagagcaccaggtggatgacgtctccaacacactcaaacgcttcttcagggagttagag
gagggactgttcacatcagaggatggcagcacctggctcagtactgctgccattcaggat
gaaagtatgaaaatctcccagtaccagctgctgttcaacagactgcctcgtgtcaacaag
gctacactacaagcccttatcaaccacctctattgtgtgcagcgtttttctgagctgaac
cagatgaacctccataacctggccatagtgttcggtcccacgctgttccagactgacggg
aaggactacactgctggccgtgccatagaggacctcatacagcactacacacacatcttt
gaggtggatgagcagcagctaaagaagcagctagacgagatcactgttatcatccaagtg
cgagagaaactcaacacaaagtttcctagtactgaacctggaggacacttcatctgtaca
gtgtacctggaggaaaagaaggacacagcagagcaacatgtcaagatccctggttctatg
acagcagcagagctgacctgtgaggttctggaccggcgtaacatcccagttaaaagcaaa
gagtactggagctgctgggaggtgtgcgacaaggaggaaatggaacgtccactgcactat
caggagcgagtcttacccatccttcactcctctggcactgactccgatctgctcatcaag
aaacacgtcgctatggacgcgatgattgtctacctggccagtaaagtggatgtatccaaa
cacgggatgatgaaattcagagaagagcgaagcatcttgggattaggactgtccactgga
agtttccacgaccgatattttatcctcaattccacctctctcagaatgtacaaggaagtc
agaagtaaccgtccagaacgtgattggccagtgaaaaacctaaaggtctacttgggtatt
aagaagaaactccgtcctcccacatgttggggactgacagtggtgtgtgagagtaagaaa
caggagaagccagagagacagcagtggtatatctgctgtgacacccagtcagaaatgagg
gagtggtatgctacttttcttagtatccagtacaatggcgacgtgtggcctcaggacgga
ctccagcagacacgggtgagccgcgtgttgccagacacgcgtcatggtaacgtgtcactg
ataccactacgtggcagtgagaatgagatgcggaacagcgtagccgctttcagccaagac
ccgcttgctctctttagagatgttcgatag
DBGET
integrated database retrieval system
