Siniperca chuatsi (mandarin fish): 122879185
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Entry
122879185 CDS
T08948
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122879185 (trpc4b)
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122879185 (trpc4b)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_3
Ank
Ank_4
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
122879185
NCBI-ProteinID:
XP_044058952
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Position
LG7:complement(24426140..24437077)
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AA seq
883 aa
AA seq
DB search
MSQLYYRKTDNSSYRDRIPLRIVRAESELSALERAYLGAVERGDYGSVKQALAEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSYNVYVGDALLHAIRKEVVGAVELLLNHKK
PRGEKQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQRGVSIPQPHAVRCNCME
CVASSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELKELSTVENEFKSE
YEELSHTCKQFAKDLLDQTRSSKELQIILNYRDDINPLLDENGNDLARLKLAIKYCQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKLLTCIFIGLLFPLLSIFYLISPKSRYGLFIR
KPFIKFICHTASYLTFLFLLFLASQHIASAKPDFQGPPPTTVEWIILPWVLGFIWTEIKQ
MWDSGFQDYIDDWWNLMDFIMNSLYLATISLKIVAYAKYSGEKARCSWEMWHPTLVAEAL
FAIANIFSSLRLICLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNEGNNCTGIRCNQQNNAFSTLFETLQSLFWSVFGLISLYVTNVEPDHEFTEFVGTTM
FGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNIV
PSPKSFYYLVEWIKMHLFKRQSIKRLETFETLGRRAAENVRLNHEYQEVLRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGKPQGAVAGQVASSTLAYPGNSFKY
SLKRPTDEPQQKLNVFDVTTTTLQDVSDAGSLQRQSRLPSQKFDEIYSLSEEDMLGSGGQ
RKEQLQTEKVIVEVLRKGEKDIQEIENSCKEHAKEVKNGPKNI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtattacaggaaaactgacaactcctcatacagggaccgcatccctctg
cggatcgtacgggccgaatctgagctctctgccctggagagggcctacctgggggctgtt
gagaggggagactatggcagtgtgaaacaagccctggcagaggctgagatctacttcagg
atcaatatcaactgcatcgaccccctgggacgcacagccttgctcattgccattgaaaat
gagaacctggagatcattgagctgctgctcagctataatgtatatgtgggtgatgccctg
ctacatgccatccgcaaagaagtggtgggagctgtggagctgctgctcaaccacaagaag
ccacgcggggaaaaacaggtcccaccaattctgctggacaaacagttttcagacttcacc
ccagacatcactccaatcatccttgcagcccacacaaacaactatgagatcatcaaacta
cttgtgcagcgaggtgtttccatacctcagccacatgctgtgcgctgcaattgcatggag
tgtgtggccagttcagatgtggacagccttcgtcattcgcgctctcgtcttaacatctac
aaggcccttgccagcccatcacttattgccctctccagcgaggatccttttctcacagct
tttcaacttagctgggagctgaaggagctcagcacagtggagaacgagttcaagtcagag
tatgaggaactgtcccatacgtgtaaacaatttgcaaaggacctcttggaccagacccga
agctctaaagagttgcaaataatcctcaactaccgtgatgacatcaaccctctgctggac
gagaacggtaatgatctggcccgactgaagctggctatcaaatattgccagaaagagttt
gttgctcagcccaactgtcagcagctgctggcatctcggtggtatgatgagttcccaggc
tggaggaggcgtcactgggcaggaaagctcctcacgtgtatcttcattggcctcctcttc
ccactgttatccattttctacctgatttctccaaagagcagatatggcttattcattcgt
aagcccttcatcaagttcatctgtcacactgcttcctacctgaccttcctcttcctgctc
ttcttggcctcgcagcatatagcctctgcaaaaccagactttcagggcccaccacccacc
actgtggaatggattatcttgccctgggtgcttggctttatatggactgagatcaaacag
atgtgggatagcggtttccaagactacatagatgactggtggaacttaatggacttcata
atgaactccttgtatcttgcaaccatttctctgaagattgttgcctatgcaaagtacagt
ggggaaaaagccagatgcagctgggaaatgtggcacccgactttggtggcagaggcatta
tttgccatcgccaacatcttcagctccttacgcctcatctgccttttcactgccaactcc
catctgggccccttacagatctcactgggccgcatgctcctggacatcctcaagttcctc
ttcatctactgtctagtgttgttagcctttgccaatggcctcaaccagctctacttttat
tatgaaacaaacgagggcaataattgcacgggtattcgctgtaatcagcaaaacaacgcc
ttctcaacgctgttcgagacgctgcagtcattattttggtctgtatttgggctgatttcc
ctctatgtgaccaatgtggaaccagaccatgaattcactgagtttgtgggcactaccatg
tttggcacgtacaatgtcatctccctggtagtgcttctgaacatgctaattgcaatgatg
aacaactcctaccagcacattgctgatcatgcagatatagagtggaaatttgcaagaaca
aaattatggatgagctattttgaagaagggggaactttgccatctccattcaatatagta
ccaagtccaaagtctttttattatctagttgaatggataaagatgcatttgtttaagaga
caaagcataaaaagacttgaaaccttcgaaacattggggagacgtgcagccgaaaatgta
agattaaaccatgagtatcaggaggttttgaggaaccttgtgaagcggtatgtggccgca
atgatcagagatgccaagacagaggaagggttgacagaagagaatttcaaggagcttaag
caggatatctccagcttccgctatgaagtcctgggaatgatgaagggtaaacctcaaggt
gcggttgcaggtcaagttgcaagctccaccttggcttaccctggaaactcattcaaatat
tctctgaaacgccctactgatgagcctcaacagaagctgaatgtatttgatgtgaccacc
accaccctgcaggatgtctcagatgctgggtccctccagagacagagcagactcccctct
cagaaatttgatgaaatatattcattatcagaggaagatatgttgggatctggtggacaa
agaaaagaacaacttcagactgaaaaagtaattgtggaagtcttacggaaaggggagaag
gacattcaggagattgaaaattcttgcaaagagcacgctaaggaagtgaaaaatgggcca
aaaaatatataa
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