Siniperca chuatsi (mandarin fish): 122879235
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Entry
122879235 CDS
T08948
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122879235 (hnf1ba)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122879235 (hnf1ba)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
122879235
NCBI-ProteinID:
XP_044059060
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Position
LG7:22461793..22478675
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AA seq
616 aa
AA seq
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MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPPSFGVKLESLPMSPAPPQS
GKMNGADADSKPVFHTLTNGHSKGKLSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRA
EVERMLAEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAAL
YTWYVRKQREILRQFNQAVQGCGSNMTDKGNQDPVFFFPEFNPSSQGMGQPGDEVGSEPS
SKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLG
SNLVTEVRVYNWFANRRKEEAFRQKLAMDAITVPPHSINPLLSHSSPHHPQNSASPPMRY
SQGPGEVTSSTTISHHSSNAMQTSQSVLQQVSPGGLDHSHSLLSPDTKMISGSGGGLPPV
STLTNIHSSHHSHQQTQNLIMPLSGVMAIAQSLNTSQAQTVPVINSVAGSLAALQPVQFS
QQLHSPHQQSLMQQSPSHMSQQPFMATVTHSHMYPHKQEPPQYSHPSRFPSAMVVTDGNS
ISTLSSMSSSKTDAPVNKMVQLGGLSWSFRFGGAADVQMLSFGSKLIDETDIWRVYASEF
LFPLKQPSNQSPVPST
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgttctctaaaatggtatccaagctgacatccctgcagcaggagctcctcagcgccctg
ctggactcaggagttaccaaagatgttctgatccaggccctggatgatatggaccccagc
ccgccgagctttggagtaaaactggagagtctgcccatgtcgcccgctcctcctcagagc
ggcaagatgaacggagcggacgcggactcgaagcccgtcttccacacgctcaccaacggc
cacagcaagggcaagctgtccggggacgagggctccgaggacggggacgactacgacacc
ccgccgatactgaaggagctccagtcgctcaacacggaggaggccgccgagcagagggcg
gaggtggagcgcatgttggcagaggatccatggcgtgctgcccgcatgatcaaaggttac
atgcagcagcacaacatcccccaacgggaggtggtggacgtcacggggctgaaccagtct
cacctctcccagcacctcaacaaaggcacgcccatgaaaacacagaagcgagcggccctc
tacacctggtatgtcaggaaacagcgggaaattctccgacagttcaaccaggcagtgcaa
ggttgtggcagcaatatgacagacaaaggcaatcaggatccggtgttttttttcccagag
ttcaacccgtccagtcagggcatgggtcagcctggcgacgaggtcggcagtgaaccctcc
agcaagaaaatgagacgtaaccgtttcaaatgggggcctgcatctcagcaaatcctgtac
caggcctatgaacggcagaagaaccccagcaaggaggagcgggaagccttggtagaagag
tgcaacagagccgagtgtcttcagagaggcgtctccccctccaaagctcagggcctcggc
tctaatctggtcacagaagtgcgagtctataactggtttgccaaccggcgtaaagaggaa
gccttcaggcagaagttggccatggacgccatcactgtacctcctcacagcatcaaccct
ctgctgtcacacagctcgccacatcatccccagaacagcgcttcgcctcccatgcgttac
agccagggccccggtgaggtcacctcctccactaccatcagtcaccacagtagcaacgcg
atgcagaccagccagtcggtgctccagcaggtgtctccgggaggactggaccacagccac
agtctgctgtcacctgacaccaagatgatttcaggttcaggtggaggacttcctccagtc
agcacactgaccaacatccacagttcccatcacagccatcagcagacacaaaacctcatc
atgcctctatctggagtcatggccatagcacagagtttaaacacatcacaagctcagaca
gtgccagtgatcaacagcgtggcaggcagccttgcggcgctgcagccggtgcagttttcc
cagcagctccacagcccccaccagcagagcctgatgcagcagtcccccagccacatgagc
cagcagccgttcatggctactgtcacacactcgcacatgtatcctcacaagcaagagccc
ccacaatattcccacccgtcacgtttcccctcggccatggtggtcacagacggcaatagc
atcagcaccctcagctccatgtcatcaagcaagacggacgctcctgtaaacaagatggtg
caactcgggggtctctcctggagttttcgttttgggggcgctgctgatgttcaaatgctt
tcatttggctccaaactaatagacgagacagatatatggagagtatacgcctcagaattc
ctatttcctctcaaacagccgtctaatcaatcacctgttccctcaacctga
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