Siniperca chuatsi (mandarin fish): 122879266
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Entry
122879266 CDS
T08948
Symbol
slitrk3a
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122879266 (slitrk3a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
122879266
NCBI-ProteinID:
XP_044059116
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Position
LG7:complement(12252255..12262382)
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AA seq
904 aa
AA seq
DB search
MLWVTLLSTIALGWTTPIPLLEDSEEIDEPCFEPCYCEVKEGIFHVHCDSKGFTNVSQIS
QIWSRPFKLNLQRNSMRKLYFNSFLHLNNAISINLGNNALQDIHAGAFNGLGILKRLFLH
ENKLEVFRNDTFLGLESLEYLQADYNVIKRIESGAFRHLHKLRVLILNDNLIPVLPNYLF
RSVSLTHLDLRGNRLKTLPYKGTLEYVGRSLMEIQLEENPWNCVCEIVQLKTWLERIPYT
ALVGEITCEYPFHLHGKDLREIKRSELCPLLSDAEIEAKLGIPRVPFSNENTWPTKPSSM
LSSFHNTASSVEYKERVVKPTKRSRPTKNPPTPRSIYPGMNQPPIAGYQTRPPIPIICPA
GCTCNLHINDLGLTVNCKEKGFHNISELLPRPLNAKKLYLSGNLIQKIYRSDFWNFSSLD
LLHLGNNRISYVQEGAFINLPNLKSLYLNGNDIERLSPGMFRGLQMLSYLYFEYNVIREI
QPNSFSLMPNLQLVFLNDNLLRSLPTDAFAGTNLARLNLRNNYFLSLPVRSVLEHLTSIV
QIDLHQNPWDCSCDIIPLKQWLEKLSSVIVVGDVICKTPQFAFGKDLRSLEVEVICPELK
YSSGPSPALPGGDDLTTGSSDTGEAGGRGAVPLSVLILSLLILFISAVFVAAGLFAFVLR
RRKKLPFRKRSEVDLTGIQMQCRIFEDPPRQSSAGNTGTPEKPTPSMHTHTHTSHTHAHG
HVYDYIPHPVTQMCNNPIYKPREGEIAEDDRAQFSEKKDNGSSSNSNYRTLLEKEREWTL
AVSNSQLNTIVTVNHTTADMAGFHENGGLCPTVIDSQRPTPTVGFVDCLYGTVPKLKDMH
VAHAHPPGMQYPDLQQDARLKETLLFTAGKGCYPDPSQSDYLELRAKLQTKPDYLEVLEK
SYRF
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggttaccttgctgagcaccatagccttaggatggaccaccccaatcccacta
ctagaggactccgaggagatcgacgaaccctgcttcgagccctgctactgcgaggtcaaa
gagggcattttccacgtccactgtgacagcaaaggatttacaaatgtcagccagatctcc
cagatatggagtcgtcccttcaagctcaacctgcagagaaactcaatgaggaagctttac
tttaacagcttcctccatcttaacaatgctatatccattaatctgggtaataacgccttg
caagatatccacgctggagcgttcaatggcttaggaatactcaaacggttgttcctacat
gaaaacaaactagaagttttccggaacgacacttttctggggttggagagtttagagtat
ctccaggcggactacaatgttatcaaacggattgaaagtggtgcattcagacaccttcac
aaattgagagtgctcatactaaatgacaatctgatccccgtgctcccaaattatcttttc
cggtctgtgtcactcacacatctggatctaagaggaaacagactaaagacattgccgtat
aagggcacgctggagtacgttggaaggagcttaatggaaatccagctggaggagaacccc
tggaactgtgtgtgtgagattgtccagttaaaaacatggctggagagaatcccttataca
gctctagttggtgagatcacatgtgagtacccattccacttacatgggaaagacttacgg
gaaatcaaacgcagtgagctctgtccgctgctctccgatgcagagattgaggccaagctg
ggaattccccgggtcccattcagcaatgagaacacatggcctactaaaccttcctccatg
ctctcctcctttcacaacacagcctcttctgtggaatacaaggaaagagttgtcaagcct
accaaacgatctcggcctacaaagaaccctccaacccctcgtagcatctacccaggcatg
aaccagccccccattgctggctaccaaacaaggcctcccatcccaatcatttgtccagct
ggatgtacttgcaaccttcacatcaatgacctggggctaacagtgaactgtaaagagaaa
ggctttcacaacatctctgagctcctgcctcggcccctcaatgctaagaaattgtatctc
agtgggaacctaatacagaaaatctaccgttctgatttctggaacttctcaagtttggat
ttactgcatttagggaataatcggatatcctacgtacaggagggtgcctttatcaacctg
ccaaacctgaaaagtttatatctaaatgggaatgacattgagagactctcccctggtatg
tttcgggggcttcagatgttgagttatctttactttgagtataatgtcatacgtgagata
caacctaactccttctccctgatgccaaacctccagctggttttcctcaatgacaacctg
ttacgctccctccccactgacgcctttgctggcacaaaccttgcacgcctcaacctccgt
aacaactacttcctttccctgcctgtgcgtagcgttctggagcatctgacctccattgtc
cagattgatctccatcagaacccctgggactgctcctgtgatattatccccctcaaacag
tggctcgaaaaactctcctctgtcattgtggttggagatgttatctgcaagacacctcag
tttgcttttgggaaggacctgcgttcactggaggttgaggtcatctgtcctgagctcaaa
tattcttcaggcccctcaccggccctgcctgggggggatgacctcaccacagggagctct
gacacgggggaggcaggtgggagaggggctgtcccactgtctgtcctcatcctcagccta
ctcatcctcttcatctctgctgtgtttgtggctgcagggctattcgcctttgttcttcgt
cgcaggaagaagctgcccttccggaaacgttctgaagtagatctgacggggatccaaatg
caatgcaggatttttgaggacccaccaaggcagagtagtgctggtaacactggcacacca
gagaaaccgacacccagtatgcacacacacactcacactagtcacacacatgcccatggt
catgtttatgattacatcccacaccctgtgactcagatgtgtaacaaccccatctataag
cctagagagggggagatagcagaggacgacagagcgcagttttcagagaagaaagacaat
ggcagcagtagcaacagtaactacagaaccttgttagagaaagagagagaatggaccctg
gccgtctccaactctcaactcaacaccatcgtcacagtcaaccacaccacggctgacatg
gcaggatttcatgaaaatggagggctctgccctacagtaattgacagtcagaggcccaca
ccaacagtgggctttgtagactgtttgtatgggacagtacccaaactaaaggacatgcat
gtggcacatgcgcacccaccaggcatgcagtacccggatttgcagcaggatgctcggctg
aaggagacattgcttttcacggcggggaaaggctgctaccccgacccgtcccaaagcgat
tacctcgagttaagggccaaacttcaaaccaagccggattacctcgaagtcttggaaaaa
tcttaccggttttaa
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