Siniperca chuatsi (mandarin fish): 122879415
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Entry
122879415 CDS
T08948
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122879415
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122879415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
122879415
NCBI-ProteinID:
XP_044059415
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Position
LG7:complement(21710872..21724560)
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AA seq
679 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLEHWLADCTEIHILEA
EANNAAIVSQWHQEPKEKVVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSSGYAPRAPSSPYHPRQGSDEWPSSA
EALDPGHAWHDKSPSSSTSPAGQNGHMPFPGGMSSPINSNNAGLGGQMQPSPLKKSMCVI
PSSLQACGSEWVSQDDAGGRQNFIPTDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGS
GMKDVPAWLKSLRLHKYASLFSQMTYEEMMILTEQHLESQNVTKGARHKIALSIQKLRER
QSVLKSLEKDILEGGNLRNALQELQQIIITPIKAYSPASAAQTAPDTATTPDTATSSSEA
TTTGADKEQASEGFQSHNPPSCDGDSSATPISDGDIAGQFTRVMGKVCTQLLVSRPDEEN
ISCYLQLIEKCLIHEAFTETHKKRLVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWTYGSN
SLPTAGSVSGGVARRGQRQFQMTPRGLTAGRMGLLSPGGIGGASPRHTLTSPALAGQGRQ
NLWFANPGGSNSMPSQSRSSVQRTHSLPVHTSPQTMLMFQQQECQVPGADLEINPTLESL
CLSMTEHALGDGTDRTSTI
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtaggtatcctcacagattggttcaagggctggaatgagtgt
gaacagacggtggcactgttgtccctcctgaagagggtgtcccgcacccaggctcgcttc
ttacacatctgccttgaacactggctggcagactgcacagagatccacatcctagaagct
gaagccaacaatgcagcaattgtcagccagtggcatcaggagccaaaagagaaggttgtg
tccttgctgctgtctcatctgcctttgctgcagccacgcaacagtgaggccaaatgtgag
tacatgaagctgctgcagaaggtgttgagtcacactattgagagtagcctgtttgtggaa
gaaagcagacagctactgtcctacgcgctcatccaccctgccaccacactggatgaccgc
acctctcttgccatgtggctaaaccacctggaggagcacctatccagtggctatgcaccc
cgggcgccatctagtccctaccacccgcgccagggctcagatgaatggcctagctctgct
gaggctctggaccccggccatgcctggcacgacaagtccccttcatccagcacttctcca
gcaggccagaacggacacatgcctttcccaggcgggatgtcctctcccatcaacagcaat
aacgcaggtctgggtgggcagatgcagcccagccctctgaagaagtccatgtgcgttatt
ccttccagtctccaggcttgtggctctgagtgggttagtcaggatgacgctgggggccgg
cagaacttcattccaacagaccacgcacccctgtcaccccagagcagcgttgcctcttca
ggcagtgagcagacagaagaacagggctccagtcgcaacaccttccaggaggatggcagt
ggcatgaaagatgttcctgcatggttgaagagtcttcgccttcataaatatgcatcactt
ttctcccagatgacctatgaggagatgatgattctcacagagcagcacctggagtcgcag
aatgtcactaaaggagcacggcataagatcgccttgagtatccagaaactgcgagagagg
cagagtgtgctcaagtctttagaaaaggatattttggaaggtggaaacctgcgtaacgcc
ctccaagagcttcaacagatcatcatcacacccatcaaggcctacagcccagccagtgca
gcacagaccgccccggacacagccaccaccccggacacagccacttcctcttcagaagcc
actacaacaggagcagacaaagagcaggcctcagagggcttccagtcccacaacccacct
tcctgtgatggagactcctcagccacacctatctcagacggcgacattgctggacagttc
acccgtgtcatgggtaaagtgtgcacccagctgctggtgtcaagaccagatgaggagaat
atcagctgttaccttcagctcattgagaagtgtctgatacatgaggctttcacagaaact
cacaagaaaaggctggtctcttggaagcagcaggtcctcaaactgctccgcctcttccct
cggaaagctatgctggacatgcctgtgtaccgacagaaaggctggacctatgggtccaac
tccctccccacagcaggctctgtgagtggaggtgtagcgcggcgtggccaaaggcagttc
caaatgacccctcgtgggctcacagctgggcgcatgggtcttctgagtcctggcgggatc
gggggagcatctccacgccacacgctcactagtcctgcgctggcaggccagggtagacaa
aacctgtggtttgccaaccctgggggcagtaacagcatgccaagtcagagtcgcagctct
gtgcagcggacccactcactccctgtccacacttccccacaaaccatgctcatgttccag
cagcaagaatgccaagttccaggtgctgacctggagatcaaccccacgctggagtcactg
tgcctcagtatgacagagcatgccttaggggatggaacagaccggacatcaacaatatga
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