Siniperca chuatsi (mandarin fish): 122879441
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Entry
122879441 CDS
T08948
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122879441 (irx6a)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122879441 (irx6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
122879441
NCBI-ProteinID:
XP_044059473
LinkDB
All DBs
Position
LG1:complement(26094144..26099892)
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AA seq
510 aa
AA seq
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MVTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTGGSQTAAAAAAAASF
CCPSYENRLLASSRTELNAALGMYSSPYAAAAAASQNYANYFPYSTDPSAIYSTLNPQYD
IKDSTGTLHSGITQTAAYYPYDHSLGQYQYDRYGTVDFNSSARRKNATRETTSTLKTWLY
EHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKASDDRKDDL
NKDDQDCVTKDSNDCKEEKDLHLSDLEDMDEDECDKLDSDCEKVAADEQDLQRVMAVSGA
PQKRDCSSELHLSLTNSFHTFPCAIKGVTALPPLPSDFLDPLASKAASSTGPTGTLSLSH
FEASDKPRIWSLARTAASGVILSPQQHGSELRTGNSAGDCQLQSTRLTGAPTGQCGGMRG
LHESSSVANTESPFPEGSSLHSKVYGTGSYSHKDLQLHCSSYAALPDTCQYSTIEGFSGG
KAETQPSDLSDACGTVQDDKVTAFRPVMKR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagcagctatgtctttctcgcaatttggatacccttacaatgcaact
tcacagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtctctgacgggacaggcggctcccagaccgccgctgccgccgccgccgccgcctccttc
tgctgcccgtcctacgagaaccggctcctggcgagcagccggacggagctgaacgcagcg
ctggggatgtacagctctccctacgccgcagcggccgccgccagccagaactacgccaac
tacttcccttacagcaccgacccatccgctatctactccactctgaatccccagtatgac
attaaggacagcacaggcactttacactctggcatcactcaaactgctgcatactatcct
tatgaccattcactgggacagtatcaatatgacagatacgggacagtagactttaacagc
tcagccagaagaaagaacgcaactcgtgaaaccaccagcaccctgaaaacatggttgtat
gagcaccgcaagaacccctaccccaccaagggagagaagatcatgctggccatcatcacc
aaaatgaccctcacccaggtgtccacctggttcgccaacgccaggaggaggctaaagaag
gagaacaagatgacctggtcaccaaagaacaaggccagcgatgacaggaaggatgacctt
aacaaggacgaccaagactgtgtcaccaaagattctaatgattgcaaggaggagaaggat
ctgcatctaagtgatctggaggacatggacgaggacgaatgtgacaagctggacagtgac
tgtgaaaaggtggctgccgatgagcaggacctccagagggtcatggcagtatctggagcc
cctcaaaagagagactgcagctcggagctgcacctgagtttaacgaacagcttccacacg
ttcccctgcgccatcaaaggtgtcaccgccctccctcctctcccgtctgatttcctggat
cctttagcgtccaaggcagcctcctcaaccggccccacgggaacgctgtccctgtctcac
tttgaagcatcggataagcctcggatttggtctctggctcgtaccgcggcttcaggggtc
atactgagcccccagcagcatggctcagagctgaggacaggcaactcagccggggactgc
cagctccagagcaccaggcttaccggggctcctactggacagtgtggaggcatgagaggc
ctccatgaatctagcagtgtcgccaataccgagagccccttccctgagggctcatccttg
cactcaaaagtctatggcactggcagctacagccacaaggacctccaactgcactgttca
tcctatgctgcactcccagacacatgtcagtactccactattgaaggattctctggtggc
aaagcagagacacagccatctgacctcagcgatgcctgcgggaccgtgcaggatgacaag
gtcactgcgttcagaccagtgatgaagaggtga
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