Siniperca chuatsi (mandarin fish): 122879451
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Entry
122879451 CDS
T08948
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
schu04020
Calcium signaling pathway
schu04510
Focal adhesion
schu04540
Gap junction
schu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122879451 (pdgfd)
04020 Calcium signaling pathway
122879451 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122879451 (pdgfd)
04540 Gap junction
122879451 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122879451 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
schu04052
]
122879451 (pdgfd)
Cytokines and neuropeptides [BR:
schu04052
]
Cytokines
Growth factors (RTK binding)
122879451 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
122879451
NCBI-ProteinID:
XP_044059493
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All DBs
Position
LG7:complement(14443695..14499102)
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AA seq
377 aa
AA seq
DB search
MSGPVLFQMWMVLLLGIITRVGMTQVSTAKVMRGNVRRDDSNRLTTDLFRKEENTTVTPL
GGAIHSPRYPNAYPRNLMLSWKLLSPPGSRIHLEFDGHFGLEEAENGVCRYDFVEVEDQS
ETSTIIWGRWCGQKAPPSLNSKTNSLRVTFKSDDYFVAKPGFKVYYSLLYDSPLPASITN
WEAVTLPMSDSGGGQMPATVTEVPFSLEDLDRTIAAFDTVEQLLKSLSPDTWKQDLDSIY
TQTHIHYRSRAYYLASRHNKIDLNRLYDDVKRYSCTPRNYSVNLREELRVTNAVFFPRCL
LVKRCGGNCGCGTNNWNNSCTCQASKTTVKLHEVLKYAPEVTLNQRHRKPRMHWVIQEIF
LAHHETCECACPSQPPR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaccggtgcttttccagatgtggatggttttattgttggggattataaccagg
gtcgggatgactcaggtctccaccgccaaagtgatgaggggtaacgtcaggagagacgac
agcaatcgcctcaccacagacttgttccgcaaagaggaaaacaccacagtaacaccactg
ggtggagccatccacagcccccgctaccccaacgcttacccccgcaatctgatgttgtca
tggaaactgctgtcaccaccagggagccgcatacacctggagtttgacggacacttcggc
ctggaggaggctgagaatggagtgtgcaggtatgactttgttgaagtggaggaccaatca
gagaccagcactataatttggggtcgctggtgtgggcagaaggcaccacctagtctcaac
tccaaaaccaactctctcagagtcaccttcaagtctgatgattactttgttgcaaagccg
ggattcaaagtctactactcactgctgtatgactctcctctgcctgcatccatcaccaac
tgggaggctgtcactttgcccatgtcggacagtggtggagggcagatgccagcgactgtc
acagaggttcctttctcactggaggacttggaccggaccatagctgcctttgacactgta
gaacagcttctcaaatccctgagcccagacacctggaaacaggacctggacagcatctac
actcaaacacacatacattacagatccagggcctattatctggcaagcagacataataaa
atcgatctgaaccgtctctatgacgacgtcaagcggtacagctgtactcctcgcaactac
tctgtaaacctgcgtgaggagctgagggtcaccaatgctgtcttcttccctcgatgtctg
ctggtcaaacgctgtggaggcaactgtggctgcggaaccaataactggaacaacagctgc
acctgtcaggcctccaagacaacagtcaaactacacgaggtgctgaagtacgccccagag
gtcactctgaatcagcgccatcggaagccgcggatgcactgggtcatacaagagatcttc
ctcgcacaccatgaaacatgcgagtgtgcgtgtccctcccagccccctcgctga
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