Siniperca chuatsi (mandarin fish): 122879471
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Entry
122879471 CDS
T08948
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6 isoform X1
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122879471
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122879471
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
122879471
NCBI-ProteinID:
XP_044059534
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All DBs
Position
LG7:15109064..15120450
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AA seq
1021 aa
AA seq
DB search
MVQLYCWGDSSRGQFGPQTALSPVSWTDVPGVITDICCGDEHTLFLTRDGGVLSCGHNSQ
GQLGRTKCKNGRTPGRVEGLGDVVSMACGRDHCLAVCTSGQVFSWGAEEDGQLGMLPQLL
CNHHRPSRVPIPLRVPVIQVACGSSHSLALTKGGDVFSWGLNSHGQLGLGKEVSLQYTPV
LVIALTGVAVTQISAGATHTLFLTLPGLVYCCGANKSGQLGLNRVDEKGRFNICMVPALR
PLGVSFISCGEAHSAVLTKDGQVFTFGEGRYGQLGHNSSADEVKPRLVEGLDGPTSQISC
GRCHTLVLGSSGQLWAFGNGTKGQIGTGRPEDSLSPTLVQLPWTTDSAAALPKADLKISA
GWNTNFTYASPTKSLDRGQITGRLDETKLQKWLSVRHGNAEAKREIVSMFFTSSSLVASF
TKANGPPSEAGALTVDLETASRAFDKLLAIPWIKQSVHLNVLMDLLVLSRTALKSPEILL
ILLTCPLLQEDSNVMNIVLPLAIVIAEMNEKNQETLKRWWSSLTPSTLTKHILVFKNALA
FMLKNGLLATHNPGVKFLLEVLKLLYKANKAGKSYKVPLSTFYVEEINSNVQPTEDVTLW
QAFSGVEDDVNTPAIFCRYPFLFTLVCKVAIFNIFALIMKEAHNIIHEWALRWPDQLWVD
PPDSVPAPVFLLTLRRTHLVEDTFRQLGTADHCAFKRKLLVQFVDDRKVMNVNQRDFFLH
VFDELKAPESEMFMYNERETLAWFPPRPKVEEKTYFLFGVLCGLALYNHNIIHLPFPLVL
FKKLLNFKPSLDDMRDFEPVVGESWRCMMEDYTPDEVKNLETTFTVSWGGETVELDPTET
GKLVTWSNRKEFVAAFVDYAFNKSVEGVFGAFKRGFFKVCDINVVEFFQPEELQVVMVGQ
ENYDWEAFKQNTVYEGDYHAEHPNIVTFWEVFEKMTAEEKKKFLLFLTGCDRVPFLGMES
IKMRVAVLPDSTDLHLPESLTCHCLLLLPTYQRYPVERTMQTRLLQAINHNRGFWKEDPT
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtactgttggggagacagctccaggggacagtttggtccacagacagcc
ctcagtccggtgtcctggactgacgtccccggggttataaccgacatctgctgtggggac
gagcacactttattcctcaccagggatggaggggttttatcatgtggacacaactcacag
ggtcaacttggacgaacgaaatgtaaaaatggaagaacaccaggtcgtgtggaggggttg
ggtgatgtggtgtcgatggcttgtggtcgggaccattgtctggctgtgtgtacatctgga
caggtgttctcctggggggcagaagaggatggacagctaggcatgttaccgcagctactg
tgcaaccatcacagaccaagtcgggtgcctataccactgcgagtacccgtgattcaagtt
gcttgtggaagctcccactccctggcactgactaaaggaggagatgtcttctcgtggggt
ttgaacagtcatggccagctaggcctggggaaggaggtgtcactgcagtatacacctgtc
ctggtgattgctctgaccggcgtagcggtgacccagatttcagccggagcgacccacact
ctgttcctcacactcccaggcctggtgtactgctgtggggccaacaaatctggccagctg
gggctcaacagggtggatgagaagggcaggttcaacatctgtatggtacctgccctccga
cctctgggtgtctccttcataagctgtggagaggcacactctgctgtgttaacaaaggat
ggccaggttttcacttttggagagggacgctacggtcagctcggtcacaactcctctgct
gatgaagtgaaacccagactggttgaaggtctggatggacccacctcacagatttcatgt
ggcagatgtcacactctggttttgggctcctctggccaactgtgggcttttggcaatggg
accaaaggtcaaattgggactggacgaccagaggacagtctgagtcccactctggtacaa
cttccatggaccacagacagtgcagcagccttacccaaagcagacttgaaaatatcggct
gggtggaatacaaacttcacttatgcttcacctacaaagagcttggaccgaggtcagata
actgggcggcttgatgagaccaaactgcaaaaatggctgtcagtgagacatggcaacgca
gaggcaaagagagaaatagtttcaatgtttttcacaagttcaagtcttgttgcaagtttc
acgaaggccaatgggcctccatcagaagcaggtgccttaactgtggaccttgagacagct
agccgagctttcgacaagctgctggcaataccatggatcaaacaatcagtacacctaaac
gtcctgatggacttgcttgtcctttcaagaactgccctaaaatcaccagagatcctcctg
attctgctgacgtgcccccttctccaagaggactctaatgtcatgaacattgtgttgccg
ttggctatcgttattgcagaaatgaatgagaagaatcaggaaacactaaaacgctggtgg
tcttccctgacaccctccacactaacgaagcacatcttggtgttcaaaaatgccttggcc
ttcatgctaaaaaatggcctcctggcaactcacaacccaggagtcaaattcctgctggaa
gtcctcaagctgctctacaaagcaaacaaagctggaaagtcctacaaagtcccactgagc
accttttacgttgaggaaatcaatagtaatgtgcagccaacggaggacgtcactctttgg
caggcattttctggagtggaggatgacgtcaacacacccgccattttctgccgctaccca
ttcctgttcactctggtttgcaaggtggcaatctttaacatctttgcattgataatgaag
gaagcgcacaatataattcatgaatgggctttgaggtggcctgatcaattgtgggtagat
cccccagactctgtcccggctccggtcttcctgctcactctgagacgaactcacctggtc
gaggacaccttcagacagctcggtacagccgaccactgcgccttcaaaaggaagcttctg
gtacaatttgtggatgacaggaaggtgatgaatgtgaaccaaagggacttcttcctgcat
gtgttcgatgagctgaaagctcccgaatctgaaatgttcatgtacaacgagagagagact
ctggcctggttccctccaaggccgaaagtggaggagaagacatacttcctgtttggcgtt
ctgtgtggcctggccctctataaccacaacatcatccacctgcccttcccactggttctc
ttcaagaagctgcttaacttcaaaccctcactggatgacatgagggactttgaacctgta
gtgggagagtcttggcggtgcatgatggaggactacactcctgatgaagttaaaaacctg
gaaactactttcactgtgagctggggtggtgagaccgttgagcttgatcccacagaaact
ggaaaacttgtcacgtggtcaaacaggaaggagtttgtagccgcctttgtcgactatgcc
ttcaacaaatcggtggagggagtgttcggagcgttcaagagagggttcttcaaggtgtgt
gacatcaacgtggtagagttcttccagccggaggagttgcaagtagtgatggtgggccaa
gaaaactacgactgggaggcgttcaagcagaacacagtttatgaaggagactaccacgct
gagcatccaaacatcgtgaccttctgggaggtgtttgagaaaatgacagcagaggaaaag
aaaaaattccttttgttcctcacaggctgcgaccgtgtacccttcctgggtatggagagc
atcaagatgagagtggctgtcttgcccgattccactgacctccacttgccagaatccctc
acctgtcattgtctgttattactgccaacctaccagagatacccagtcgagaggacaatg
cagaccaggcttcttcaggccatcaatcacaatagaggcttctggaaagaagaccctaca
ggctga
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