Siniperca chuatsi (mandarin fish): 122879646
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Entry
122879646 CDS
T08948
Symbol
relb
Name
(RefSeq) transcription factor RelB isoform X1
KO
K09253
transcription factor RelB
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
schu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122879646 (relb)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
122879646 (relb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122879646 (relb)
Transcription factors [BR:
schu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
122879646 (relb)
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
122879646
NCBI-ProteinID:
XP_044059970
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Position
LG7:complement(18859999..18874424)
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AA seq
586 aa
AA seq
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MKDMDILNGTSERGVLDIDLIQEIIREDGEQSGASLPGPPSPPANLRCQNHRSLRQSSSP
PSQPVLVARGTANQPTCNFLQPLQQPFTSREMAHPSRGAGSSRRGRSSSCLLASRSCGGI
SSQNRGGDTEMLERILEKPKLVVVEEPKERGMRFRYECEGRSAGSILGTSSTETSKTQPA
IEIQGPIDNLKRVTVTASLVTKDLPHRPHPHCLVGKDCPNGSGICVVTLNPHSSRRHSFA
NLGIQCVRRKELDVSLQKRRSQNIDPFQTGHSKGIEDMDMNAVRLCFQCELEWEDGRKDC
LSPVVSNPIYDKKATTTSQLKISCLNLDRGSCTGKTEIYMLCDKVQKDDIEIIFRRGSWK
ARGEFAQTDVHRQIAIVFKTPPYQDQNITEEVEVSVALRRLSDQMESEPVTFTYLPHNPD
PYEVKRKIKIKSDISFREKPCVTAESAPAAEQPLHFPQPLNMMSPDERLCPAQPVVSALE
EMCYEPQDSSNGNDATAILNQLLEMPALWEMIEPSMLSGFEQGPNANSTFANTDMNFNQN
FGSYAQDFSHYSDLQFNMLVNESQTPQSEVQEGPSDMVQVKTEEEL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacatggacatcttaaacggtacctctgagcgaggggtgttagacatcgatctc
attcaagaaatcatccgagaggacggtgagcagtcgggtgcctccctccctggacctcct
tctcctcctgctaacctccgctgccagaaccacaggagcctccgacagagctcctcgccg
ccatctcagcccgtgctggtggcgagaggcactgcaaatcagccaacctgcaacttcctt
cagcccctgcagcagccgttcacttccagagagatggctcatccttcccggggagctggt
tcctctcggcgaggtcgaagctcctcgtgtttgctggcctcaaggagctgcggcggcatt
tcctctcagaaccggggaggtgacaccgagatgctggagcggattctggagaagcccaaa
ctggtggtggtggaggagcccaaagagagaggcatgagatttcgctatgagtgtgaggga
cgctcggctggcagcatcttgggaacgtccagcactgaaaccagcaagactcagcctgcg
atagagattcaaggtcccattgataacttaaagagggtcacagtcaccgcgtccttggtg
accaaagacctcccacaccggcctcacccccactgcctcgtgggtaaagactgtccaaat
ggttcaggaatctgcgtggtcacgctcaatcctcacagcagccgacgtcacagctttgct
aaccttggtatccagtgtgtgaggaggaaagagctggacgtttcacttcagaagaggaga
agccaaaatatcgacccctttcaaactggtcactcaaagggcattgaagacatggacatg
aacgctgtgcgtctgtgttttcagtgtgagctcgaatgggaggacggcagaaaagactgt
ctcagcccagtggtgtccaaccccatctatgacaagaaggccacgactacatcacagctg
aagatcagctgtttgaacctggacagaggttcctgcaccggcaagactgagatctacatg
ttgtgtgacaaagtgcagaaagatgacatagagatcatcttcaggcgagggtcgtggaag
gcgaggggggagtttgcccagacagacgtgcaccggcagatcgccattgtttttaagact
ccaccctaccaggaccagaacatcacagaggaggttgaagtcagcgtcgctctgcgtcgc
ctctcagaccagatggagagcgagcctgttaccttcacgtacctgccacacaacccagat
ccatatgaggtgaagcggaagataaagataaagtcagacatcagcttcagagagaaacct
tgtgtgacagcagaaagtgcacctgcagcagagcagcccctccacttcccgcagcctcta
aacatgatgtctccagatgagaggctttgtcctgcccagcctgtggtttctgctttagag
gaaatgtgttacgagccccaggactccagcaatggcaacgatgcgacggccatccttaat
caattgctagaaatgcctgcattatgggaaatgattgagccgtccatgctctctggcttt
gagcaggggcccaacgccaattctacgtttgccaacacggatatgaactttaaccagaac
tttggctcgtacgctcaagacttttcccattacagcgacttgcagttcaacatgctcgtc
aatgagagccagactccgcagtcagaggttcaggaaggcccctctgacatggttcaggtg
aagacagaagaggagctatga
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